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GENE CARD

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Gene Card

Best human hits

CCT2; CCT7; TCP1

Species

P.mammillata

Unique Gene ID

Phmamm.g00010495

Gene Model ID

Phmamm.CG.MTP2014.S605.g10495

Location

S605:50114..55473

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S605.g10495.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

8 results

AHC0AAA58YN02

Plate: Plate_58_N02

AHC0AAA117YK23

Plate: Plate_117_K23

AHC0AAA141YD05

Plate: Plate_141_D05

AHC0AAA151YC17

Plate: Plate_151_C17

AHC0AAA155YD08

Plate: Plate_155_D08

AHC0AAA162YN15

Plate: Plate_162_N15

AHC0AAA207YJ21

Plate: Plate_207_J21

AHC0AAA216YM02

Plate: Plate_216_M02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
Cpn60/TCP-1 Pfam Chaperonin Cpn60/TCP-1 family
GROEL-like_equatorial_sf SUPERFAMILY GroEL-like equatorial domain superfamily
GROEL-like_equatorial_sf Gene3D GroEL-like equatorial domain superfamily
Chaperonin_TCP-1_CS ProSitePatterns Chaperonin TCP-1, conserved site
TCP-1-like_intermed_sf SUPERFAMILY TCP-1-like chaperonin intermediate domain superfamily
Chap_CCT_beta PANTHER T-complex protein 1, beta subunit
Chap_CCT_beta CDD T-complex protein 1, beta subunit
GroEL-like_apical_dom_sf Gene3D GroEL-like apical domain superfamily
GroEL-like_apical_dom_sf SUPERFAMILY GroEL-like apical domain superfamily
Chap_CCT_beta TIGRFAM T-complex protein 1, beta subunit
TCP-1-like_intermed_sf Gene3D TCP-1-like chaperonin intermediate domain superfamily
Chaperone_TCP-1 PRINTS Chaperone tailless complex polypeptide 1 (TCP-1)

GOSlim

34 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
RNA binding Blast molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
extracellular region Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Blast cellular component
Golgi apparatus Blast cellular component
centrosome Blast cellular component
microtubule organizing center Blast cellular component
cytosol Orthology cellular component
cytoskeleton Blast cellular component
microtubule Orthology cellular component
protein folding Orthology biological process
ubiquitin protein ligase binding Orthology molecular function
identical protein binding Blast molecular function
myelin sheath Orthology cellular component
cell body Orthology cellular component
unfolded protein binding Orthology molecular function
extracellular exosome Orthology cellular component
macromolecular complex Orthology cellular component
sexual reproduction Orthology biological process
cellular process Orthology biological process
organelle organization Orthology biological process
DNA metabolic process Orthology biological process
transferase activity, transferring phosphorus-containing groups Orthology molecular function
cytoplasmic vesicle Orthology cellular component
lysosome Orthology cellular component
vacuolar part Orthology cellular component
endomembrane system Orthology cellular component
intracellular organelle lumen Orthology cellular component
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component

GO (Orthology)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
zona pellucida receptor complex Hs cellular component
protein binding Hs molecular function
ATP binding Hs molecular function
extracellular region Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
chaperonin-containing T-complex Hs cellular component
microtubule Hs cellular component
protein folding Hs biological process
binding of sperm to zona pellucida Hs biological process
ubiquitin protein ligase binding Hs molecular function
positive regulation of telomere maintenance via telomerase Hs biological process
azurophil granule lumen Hs cellular component
myelin sheath Hs cellular component
protein binding involved in protein folding Hs molecular function
cell body Hs cellular component
protein stabilization Hs biological process
unfolded protein binding Hs molecular function
chaperone-mediated protein complex assembly Hs biological process
extracellular exosome Hs cellular component
toxin transport Hs biological process
positive regulation of telomerase RNA localization to Cajal body Hs biological process

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 795 0.0
pericentriolar material Hs cellular component 299 1.04e-94
heterochromatin Hs cellular component 299 1.04e-94
acrosomal vesicle Hs cellular component 299 1.04e-94
zona pellucida receptor complex Hs cellular component 795 0.0
RNA binding Hs molecular function 299 1.04e-94
protein binding Hs molecular function 795 0.0
ATP binding Hs molecular function 795 0.0
extracellular region Hs cellular component 795 0.0
nuclear heterochromatin Hs cellular component 299 1.04e-94
cytoplasm Hs cellular component 795 0.0
mitochondrion Hs cellular component 297 4.47e-94
Golgi apparatus Hs cellular component 299 1.04e-94
centrosome Hs cellular component 299 1.04e-94
microtubule organizing center Hs cellular component 299 1.04e-94
cytosol Hs cellular component 795 0.0
chaperonin-containing T-complex Hs cellular component 795 0.0
cytoskeleton Hs cellular component 299 1.04e-94
microtubule Hs cellular component 795 0.0
ubiquitin protein ligase binding Hs molecular function 795 0.0
azurophil granule lumen Hs cellular component 795 0.0
identical protein binding Hs molecular function 297 4.47e-94
myelin sheath Hs cellular component 795 0.0
protein binding involved in protein folding Hs molecular function 795 0.0
cell body Hs cellular component 795 0.0
unfolded protein binding Hs molecular function 795 0.0
extracellular exosome Hs cellular component 795 0.0

GO (InterProScan)

3 results

GO Term Analysis Type e-value
ATP binding CDD molecular function 0.0
protein folding CDD biological process 0.0
unfolded protein binding CDD molecular function 0.0