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GENE CARD

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Gene Card

Best human hits

JMJD4; JMJD6; JMJD8

Species

P.mammillata

Unique Gene ID

Phmamm.g00002194

Gene Model ID

Phmamm.CG.MTP2014.S61.g02194

Location

S61:45237..48284

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S61.g02194.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

15 results

AHC0AAA16YF14

Plate: Plate_16_F14

AHC0AAA4YF10

Plate: Plate_4_F10

AHC0AAA74YA16

Plate: Plate_74_A16

AHC0AAA75YC07

Plate: Plate_75_C07

AHC0AAA107YJ09

Plate: Plate_107_J09

AHC0AAA119YB10

Plate: Plate_119_B10

AHC0AAA138YD21

Plate: Plate_138_D21

AHC0AAA138YF21

Plate: Plate_138_F21

AHC0AAA138YH21

Plate: Plate_138_H21

AHC0AAA147YK04

Plate: Plate_147_K04

AHC0AAA94YH08

Plate: Plate_94_H08

AHC0AAA147YK02

Plate: Plate_147_K02

AHC0AAA165YK20

Plate: Plate_165_K20

AHC0AAA214YA12

Plate: Plate_214_A12

AHC0AAA257YF19

Plate: Plate_257_F19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
JmjC_dom SMART JmjC domain
JmjC_dom ProSiteProfiles JmjC domain
JmjC_dom Pfam JmjC domain

GOSlim

16 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
iron ion binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
metal ion binding Blast molecular function
oxidation-reduction process Blast biological process
extracellular exosome Blast cellular component
catalytic activity Blast molecular function
organelle organization Blast biological process
cellular protein modification process Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 462 3.22e-162
single-stranded RNA binding Hs molecular function 462 3.22e-162
receptor activity Hs molecular function 462 3.22e-162
iron ion binding Hs molecular function 462 3.22e-162
protein binding Hs molecular function 462 3.22e-162
nucleus Hs cellular component 462 3.22e-162
nucleoplasm Hs cellular component 462 3.22e-162
nucleolus Hs cellular component 462 3.22e-162
cytosol Hs cellular component 462 3.22e-162
plasma membrane Hs cellular component 462 3.22e-162
oxidoreductase activity Hs molecular function 462 3.22e-162
intracellular ribonucleoprotein complex Hs cellular component 462 3.22e-162
histone demethylase activity Hs molecular function 462 3.22e-162
histone demethylase activity (H3-R2 specific) Hs molecular function 462 3.22e-162
histone demethylase activity (H4-R3 specific) Hs molecular function 462 3.22e-162
identical protein binding Hs molecular function 462 3.22e-162
protein homodimerization activity Hs molecular function 462 3.22e-162
metal ion binding Hs molecular function 462 3.22e-162
dioxygenase activity Hs molecular function 462 3.22e-162
extracellular exosome Hs cellular component 42.0 3.62e-04
peptidyl-lysine 5-dioxygenase activity Hs molecular function 462 3.22e-162

GO (InterProScan)

No result

GO Term Analysis Type e-value