Login
Help

GENE CARD

Submit your Data

  1. Gene 'Harore.CG.MTP2014.S1...'

Gene Card

Best human hits

CHDH

Species

P.mammillata

Unique Gene ID

Phmamm.g00010673

Gene Model ID

Phmamm.CG.MTP2014.S624.g10673

Location

S624:35762..39711

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S624.g10673.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

7 results

AHC0AAA32YC21

Plate: Plate_32_C21

AHC0AAA63YH15

Plate: Plate_63_H15

AHC0AAA130YC02

Plate: Plate_130_C02

AHC0AAA139YH09

Plate: Plate_139_H09

AHC0AAA215YP06

Plate: Plate_215_P06

AHC0AAA242YH10

Plate: Plate_242_H10

AHC0AAA254YK05

Plate: Plate_254_K05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
GMC_OxRdtase_N ProSitePatterns Glucose-methanol-choline oxidoreductase, N-terminal
GMC_OxRdtase_N Pfam Glucose-methanol-choline oxidoreductase, N-terminal
GMC_OxRdtase PIRSF Glucose-methanol-choline oxidoreductase
FAD/NAD-bd_sf Gene3D FAD/NAD(P)-binding domain superfamily
Glucose_Oxidase_domain_2 Gene3D Glucose Oxidase, domain 2
GMC_OxRtase_C Pfam Glucose-methanol-choline oxidoreductase, C-terminal
FAD/NAD-bd_sf SUPERFAMILY FAD/NAD(P)-binding domain superfamily

GOSlim

7 results

GO Term Annotation Origin Type
protein binding Blast molecular function
mitochondrion Blast cellular component
mitochondrial inner membrane Blast cellular component
membrane Blast cellular component
flavin adenine dinucleotide binding Blast molecular function
oxidation-reduction process Blast biological process
catalytic activity Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 260 2.52e-79
mitochondrion Hs cellular component 260 2.52e-79
mitochondrial inner membrane Hs cellular component 260 2.52e-79
choline dehydrogenase activity Hs molecular function 260 2.52e-79
membrane Hs cellular component 260 2.52e-79
oxidoreductase activity Hs molecular function 260 2.52e-79
oxidoreductase activity, acting on CH-OH group of donors Hs molecular function 260 2.52e-79
flavin adenine dinucleotide binding Hs molecular function 260 2.52e-79

GO (InterProScan)

3 results

GO Term Analysis Type e-value
oxidoreductase activity, acting on CH-OH group of donors PIRSF molecular function 2.2E-82
flavin adenine dinucleotide binding PIRSF molecular function 2.2E-82
oxidation-reduction process PIRSF biological process 2.2E-82