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GENE CARD

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  1. Gene 'Moocci.CG.ELv1_2.S61...'

Gene Card

Best human hits

RBMS1; RBMS2; RBMS3

Species

P.mammillata

Unique Gene ID

Phmamm.g00010824

Gene Model ID

Phmamm.CG.MTP2014.S639.g10824

Location

S639:57898..87985

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

15 results

AHC0AAA13YP03

Plate: Plate_13_P03

AHC0AAA3YA01

Plate: Plate_3_A01

AHC0AAA9YB12

Plate: Plate_9_B12

AHC0AAA38YA16

Plate: Plate_38_A16

AHC0AAA45YA03

Plate: Plate_45_A03

AHC0AAA46YI13

Plate: Plate_46_I13

AHC0AAA54YO16

Plate: Plate_54_O16

AHC0AAA57YC17

Plate: Plate_57_C17

AHC0AAA130YO07

Plate: Plate_130_O07

AHC0AAA193YF04

Plate: Plate_193_F04

AHC0AAA194YO02

Plate: Plate_194_O02

AHC0AAA216YE22

Plate: Plate_216_E22

AHC0AAA233YD18

Plate: Plate_233_D18

AHC0AAA38YA14

Plate: Plate_38_A14

AHC0AAA54YO14

Plate: Plate_54_O14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
RRM_dom Pfam RNA recognition motif domain
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
RRM_dom ProSiteProfiles RNA recognition motif domain
Hud_Sxl_RNA PRINTS Paraneoplastic encephalomyelitis antigen
RRM_dom SMART RNA recognition motif domain

GOSlim

13 results

GO Term Annotation Origin Type
nucleic acid binding Orthology molecular function
DNA binding Orthology molecular function
double-stranded DNA binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
DNA replication Orthology biological process
RNA processing Orthology biological process
positive regulation of gene expression Orthology biological process
negative regulation of gene expression Orthology biological process
negative regulation of canonical Wnt signaling pathway Orthology biological process

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
double-stranded DNA binding Hs molecular function
single-stranded DNA binding Hs molecular function
RNA binding Hs molecular function
mRNA 3'-UTR binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
DNA replication Hs biological process
RNA processing Hs biological process
poly(A) binding Hs molecular function
poly(U) RNA binding Hs molecular function
positive regulation of gene expression Hs biological process
negative regulation of gene expression Hs biological process
mRNA 3'-UTR AU-rich region binding Hs molecular function
positive regulation of translation Hs biological process
negative regulation of canonical Wnt signaling pathway Hs biological process

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 293 1.78e-95
DNA binding Hs molecular function 293 1.78e-95
double-stranded DNA binding Hs molecular function 293 1.78e-95
single-stranded DNA binding Hs molecular function 293 1.78e-95
RNA binding Hs molecular function 293 1.78e-95
mRNA 3'-UTR binding Hs molecular function 273 2.96e-87
protein binding Hs molecular function 293 1.78e-95
nucleus Hs cellular component 293 1.78e-95
cytoplasm Hs cellular component 273 2.96e-87
cytosol Hs cellular component 293 1.78e-95
poly(A) binding Hs molecular function 273 2.96e-87
poly(U) RNA binding Hs molecular function 273 2.96e-87
mRNA 3'-UTR AU-rich region binding Hs molecular function 273 2.96e-87

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 1.02E-19
RNA binding PRINTS molecular function 4.1E-7