Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

GFI1; ZNF595; ZNF708

Species

P.mammillata

Unique Gene ID

Phmamm.g00002323

Gene Model ID

Phmamm.CG.MTP2014.S65.g02323

Location

S65:182204..188977

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

5 results

AHC0AAA42YI07

Plate: Plate_42_I07

AHC0AAA122YE09

Plate: Plate_122_E09

AHC0AAA82YN14

Plate: Plate_82_N14

AHC0AAA163YL11

Plate: Plate_163_L11

AHC0AAA230YM04

Plate: Plate_230_M04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type Pfam Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

13 results

GO Term Annotation Origin Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
protein binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
nuclear body Blast cellular component
transcription regulatory region DNA binding Blast molecular function
metal ion binding Blast molecular function
nuclear lumen Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 127 1.85e-31
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 122 1.25e-30
nucleic acid binding Hs molecular function 127 1.85e-31
DNA binding Hs molecular function 127 1.85e-31
protein binding Hs molecular function 122 1.25e-30
intracellular Hs cellular component 127 1.85e-31
nucleus Hs cellular component 127 1.85e-31
membrane Hs cellular component 127 1.85e-31
integral component of membrane Hs cellular component 127 1.85e-31
nuclear matrix Hs cellular component 122 1.25e-30
nuclear body Hs cellular component 122 1.25e-30
transcriptional repressor complex Hs cellular component 122 1.25e-30
transcription regulatory region DNA binding Hs molecular function 122 1.25e-30
metal ion binding Hs molecular function 127 1.85e-31

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 5.8E-4