Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S6...'

Gene Card

Best human hits

BTBD1; BTBD2; BTBD3

Species

P.mammillata

Unique Gene ID

Phmamm.g00011011

Gene Model ID

Phmamm.CG.MTP2014.S660.g11011

Location

S660:57029..61583

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S660.g11011.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

8 results

AHC0AAA36YA16

Plate: Plate_36_A16

AHC0AAA53YP14

Plate: Plate_53_P14

AHC0AAA69YI24

Plate: Plate_69_I24

AHC0AAA101YD13

Plate: Plate_101_D13

AHC0AAA108YM10

Plate: Plate_108_M10

AHC0AAA116YN17

Plate: Plate_116_N17

AHC0AAA189YL23

Plate: Plate_189_L23

AHC0AAA255YI03

Plate: Plate_255_I03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
BTB/POZ_dom SMART BTB/POZ domain
BACK Pfam BTB/Kelch-associated
BACK SMART BTB/Kelch-associated
BTB/POZ_dom Pfam BTB/POZ domain
BTB/POZ_dom ProSiteProfiles BTB/POZ domain
SKP1/BTB/POZ_sf SUPERFAMILY SKP1/BTB/POZ domain superfamily

GOSlim

9 results

GO Term Annotation Origin Type
protein binding Blast molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
ubiquitin protein ligase binding Blast molecular function
macromolecular complex Blast cellular component
cytoplasmic part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
intracellular part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
P-body Hs cellular component 423 4.48e-146
protein binding Hs molecular function 423 4.48e-146
nucleus Hs cellular component 275 4.14e-88
cytoplasm Hs cellular component 423 4.48e-146
cytosol Hs cellular component 423 4.48e-146
SCF ubiquitin ligase complex Hs cellular component 423 4.48e-146
ubiquitin protein ligase binding Hs molecular function 423 4.48e-146
macromolecular complex Hs cellular component 400 1.42e-137

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 3.2E-25