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GENE CARD

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Gene Card

Best human hits

AC113404.3; RAP1A; RAP1B

Species

P.mammillata

Unique Gene ID

Phmamm.g00011045

Gene Model ID

Phmamm.CG.MTP2014.S663.g11045

Location

S663:53322..56898

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S663.g11045.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

22 results

AHC0AAA24YF22

Plate: Plate_24_F22

AHC0AAA31YB02

Plate: Plate_31_B02

AHC0AAA34YN03

Plate: Plate_34_N03

AHC0AAA35YD23

Plate: Plate_35_D23

AHC0AAA41YF17

Plate: Plate_41_F17

AHC0AAA55YB17

Plate: Plate_55_B17

AHC0AAA60YE14

Plate: Plate_60_E14

AHC0AAA63YK06

Plate: Plate_63_K06

AHC0AAA65YI12

Plate: Plate_65_I12

AHC0AAA113YC18

Plate: Plate_113_C18

AHC0AAA124YG02

Plate: Plate_124_G02

AHC0AAA82YK06

Plate: Plate_82_K06

AHC0AAA98YD24

Plate: Plate_98_D24

AHC0AAA179YN20

Plate: Plate_179_N20

AHC0AAA180YB05

Plate: Plate_180_B05

AHC0AAA181YO14

Plate: Plate_181_O14

AHC0AAA196YM16

Plate: Plate_196_M16

AHC0AAA202YB22

Plate: Plate_202_B22

AHC0AAA225YJ02

Plate: Plate_225_J02

AHC0AAA228YO11

Plate: Plate_228_O11

AHC0AAA55YD19

Plate: Plate_55_D19

AHC0AAA98YD22

Plate: Plate_98_D22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Small_GTPase Pfam Small GTPase superfamily
Small_GTP-bd_dom TIGRFAM Small GTP-binding protein domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Small_GTPase_Ras ProSiteProfiles Small GTPase superfamily, Ras type
Small_GTPase_Ras PANTHER Small GTPase superfamily, Ras type

GOSlim

58 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
GTPase activity Orthology molecular function
protein binding Orthology molecular function
GTP binding Orthology molecular function
intracellular Orthology cellular component
cytoplasm Orthology cellular component
endosome Orthology cellular component
early endosome Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
signal transduction Orthology biological process
small GTPase mediated signal transduction Orthology biological process
nervous system development Orthology biological process
cell proliferation Orthology biological process
protein transport Orthology biological process
membrane Orthology cellular component
cell junction Orthology cellular component
neuron projection Orthology cellular component
myelin sheath Orthology cellular component
positive regulation of GTPase activity Orthology biological process
macromolecular complex binding Orthology molecular function
perinuclear region of cytoplasm Orthology cellular component
extracellular exosome Orthology cellular component
positive regulation of catalytic activity Orthology biological process
intracellular signal transduction Orthology biological process
protein serine/threonine kinase activity Orthology molecular function
positive regulation of signal transduction Orthology biological process
intracellular non-membrane-bounded organelle Orthology cellular component
neuron projection development Orthology biological process
enzyme binding Orthology molecular function
molecular function regulator Orthology molecular function
anion binding Orthology molecular function
guanyl ribonucleotide binding Orthology molecular function
purine ribonucleoside binding Orthology molecular function
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
cytoplasmic vesicle Orthology cellular component
lysosomal membrane Orthology cellular component
endomembrane system Orthology cellular component
whole membrane Orthology cellular component
intracellular organelle part Orthology cellular component
bounding membrane of organelle Orthology cellular component
cell surface receptor signaling pathway Orthology biological process
cellular response to organic substance Orthology biological process
protein kinase activity Orthology molecular function
organic substance transport Orthology biological process
transmembrane transport Orthology biological process
regulation of signaling Orthology biological process
cell-cell signaling Orthology biological process
cell development Orthology biological process
protein phosphorylation Orthology biological process
cell Orthology cellular component
organelle organization Orthology biological process
synapse part Orthology cellular component
intracellular transport Orthology biological process
neuron part Orthology cellular component
membrane organization Orthology biological process
chemical synaptic transmission Orthology biological process

GO (Orthology)

49 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
activation of MAPKK activity Hs biological process
GTPase activity Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
intracellular Hs cellular component
cytoplasm Hs cellular component
endosome Hs cellular component
early endosome Hs cellular component
late endosome Hs cellular component
lipid droplet Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
cell-cell junction Hs cellular component
signal transduction Hs biological process
small GTPase mediated signal transduction Hs biological process
nervous system development Hs biological process
cell proliferation Hs biological process
protein transporter activity Hs molecular function
positive regulation of neuron projection development Hs biological process
protein transport Hs biological process
membrane Hs cellular component
Ras GTPase binding Hs molecular function
Rap guanyl-nucleotide exchange factor activity Hs molecular function
GDP binding Hs molecular function
cell junction Hs cellular component
guanyl-nucleotide exchange factor complex Hs cellular component
Rap protein signal transduction Hs biological process
azurophil granule membrane Hs cellular component
specific granule membrane Hs cellular component
nerve growth factor signaling pathway Hs biological process
neuron projection Hs cellular component
myelin sheath Hs cellular component
positive regulation of GTPase activity Hs biological process
macromolecular complex binding Hs molecular function
phagocytic vesicle Hs cellular component
positive regulation of protein kinase activity Hs biological process
positive regulation of glucose import Hs biological process
perinuclear region of cytoplasm Hs cellular component
regulation of insulin secretion Hs biological process
establishment of endothelial barrier Hs biological process
extracellular exosome Hs cellular component
positive regulation of ERK1 and ERK2 cascade Hs biological process
cellular response to glucose stimulus Hs biological process
cellular response to organic cyclic compound Hs biological process
cellular response to gonadotropin-releasing hormone Hs biological process
regulation of cell junction assembly Hs biological process
regulation of establishment of cell polarity Hs biological process
negative regulation of synaptic vesicle exocytosis Hs biological process

GO (Blast)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 315 1.60e-111
GTPase activity Hs molecular function 315 1.60e-111
protein binding Hs molecular function 315 1.60e-111
GTP binding Hs molecular function 315 1.60e-111
intracellular Hs cellular component 315 1.60e-111
cytoplasm Hs cellular component 315 1.60e-111
endosome Hs cellular component 300 9.76e-106
early endosome Hs cellular component 300 9.76e-106
late endosome Hs cellular component 300 9.76e-106
lipid droplet Hs cellular component 315 1.60e-111
cytosol Hs cellular component 315 1.60e-111
plasma membrane Hs cellular component 315 1.60e-111
cell-cell junction Hs cellular component 315 1.60e-111
protein transporter activity Hs molecular function 300 9.76e-106
membrane Hs cellular component 315 1.60e-111
Ras GTPase binding Hs molecular function 300 9.76e-106
Rap guanyl-nucleotide exchange factor activity Hs molecular function 300 9.76e-106
GDP binding Hs molecular function 315 1.60e-111
cell junction Hs cellular component 315 1.60e-111
guanyl-nucleotide exchange factor complex Hs cellular component 300 9.76e-106
azurophil granule membrane Hs cellular component 315 1.60e-111
specific granule membrane Hs cellular component 300 9.76e-106
neuron projection Hs cellular component 300 9.76e-106
myelin sheath Hs cellular component 300 9.76e-106
macromolecular complex binding Hs molecular function 315 1.60e-111
phagocytic vesicle Hs cellular component 300 9.76e-106
perinuclear region of cytoplasm Hs cellular component 300 9.76e-106
extracellular exosome Hs cellular component 315 1.60e-111

GO (InterProScan)

4 results

GO Term Analysis Type e-value
GTPase activity CDD molecular function 5.89395E-118
GTP binding PANTHER molecular function 4.5E-104
signal transduction PANTHER biological process 4.5E-104
membrane PANTHER cellular component 4.5E-104