Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

CLVS1; CLVS2; TTPAL

Species

P.mammillata

Unique Gene ID

Phmamm.g00002427

Gene Model ID

Phmamm.CG.MTP2014.S68.g02427

Location

S68:241999..242848

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S68.g02427.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

1 result

AHC0AAA124YJ06

Plate: Plate_124_J06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
CRAL-TRIO_dom CDD CRAL-TRIO lipid binding domain
CRAL-TRIO_dom_sf Gene3D CRAL-TRIO lipid binding domain superfamily
CRAL-TRIO_dom Pfam CRAL-TRIO lipid binding domain
CRAL-TRIO_dom_sf SUPERFAMILY CRAL-TRIO lipid binding domain superfamily
CRAL-TRIO_dom ProSiteProfiles CRAL-TRIO lipid binding domain
CRAL/TRIO_N_dom_sf SUPERFAMILY CRAL/TRIO, N-terminal domain superfamily
CRAL-TRIO_dom SMART CRAL-TRIO lipid binding domain
CRAL/TRIO_N_dom Pfam CRAL/TRIO, N-terminal domain
CRAL/TRIO_N_dom SMART CRAL/TRIO, N-terminal domain

GOSlim

12 results

GO Term Annotation Origin Type
endosome Blast cellular component
Golgi apparatus Blast cellular component
membrane Blast cellular component
cytoplasmic vesicle Blast cellular component
Golgi apparatus part Blast cellular component
binding Blast molecular function
whole membrane Blast cellular component
intracellular organelle part Blast cellular component
early endosome Blast cellular component
bounding membrane of organelle Blast cellular component
Golgi membrane Blast cellular component
anion binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
endosome Hs cellular component 135 2.00e-37
Golgi apparatus Hs cellular component 135 2.00e-37
trans-Golgi network Hs cellular component 135 2.00e-37
lipid binding Hs molecular function 135 2.00e-37
membrane Hs cellular component 153 1.56e-44
clathrin-coated vesicle Hs cellular component 135 2.00e-37
cytoplasmic vesicle Hs cellular component 135 2.00e-37
early endosome membrane Hs cellular component 135 2.00e-37
trans-Golgi network membrane Hs cellular component 135 2.00e-37
phosphatidylinositol-3,5-bisphosphate binding Hs molecular function 135 2.00e-37

GO (InterProScan)

No result

GO Term Analysis Type e-value