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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S6...'

Gene Card

Best human hits

RDH11; RDH12; RDH14

Species

P.mammillata

Unique Gene ID

Phmamm.g00011261

Gene Model ID

Phmamm.CG.MTP2014.S692.g11261

Location

S692:26439..28972

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S692.g11261.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

11 results

AHC0AAA62YM16

Plate: Plate_62_M16

AHC0AAA100YA13

Plate: Plate_100_A13

AHC0AAA118YM19

Plate: Plate_118_M19

AHC0AAA144YE21

Plate: Plate_144_E21

AHC0AAA92YK01

Plate: Plate_92_K01

AHC0AAA178YB13

Plate: Plate_178_B13

AHC0AAA185YF20

Plate: Plate_185_F20

AHC0AAA185YL24

Plate: Plate_185_L24

AHC0AAA192YN10

Plate: Plate_192_N10

AHC0AAA222YO12

Plate: Plate_222_O12

AHC0AAA92YM03

Plate: Plate_92_M03

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
SDR_fam Pfam Short-chain dehydrogenase/reductase SDR
NAD(P)-bd_dom_sf SUPERFAMILY NAD(P)-binding domain superfamily
SDR_fam PRINTS Short-chain dehydrogenase/reductase SDR

GOSlim

25 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
intracellular Orthology cellular component
nucleus Blast cellular component
mitochondrion Orthology cellular component
lysosomal membrane Blast cellular component
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
visual perception Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
response to stimulus Orthology biological process
oxidation-reduction process Orthology biological process
mitochondrial inner membrane Orthology cellular component
intracellular protein transport Orthology biological process
cellular metabolic process Orthology biological process
organic substance metabolic process Orthology biological process
neuron part Orthology cellular component
catalytic activity Orthology molecular function
G-protein coupled receptor signaling pathway Orthology biological process
regulation of signal transduction Orthology biological process
plasma membrane region Orthology cellular component
anatomical structure formation involved in morphogenesis Orthology biological process
animal organ development Orthology biological process
neuron development Orthology biological process
anatomical structure morphogenesis Orthology biological process

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
retinoid metabolic process Hs biological process
photoreceptor inner segment Hs cellular component
retinol dehydrogenase activity Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
mitochondrion Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
visual perception Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
adaptation of rhodopsin mediated signaling Hs biological process
oxidoreductase activity Hs molecular function
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Hs molecular function
retinol metabolic process Hs biological process
retinal metabolic process Hs biological process
photoreceptor cell maintenance Hs biological process
response to stimulus Hs biological process
NADP-retinol dehydrogenase activity Hs molecular function
oxidation-reduction process Hs biological process
photoreceptor inner segment membrane Hs cellular component
mitochondrial inner membrane Hs cellular component
intracellular protein transport Hs biological process
retina layer formation Hs biological process
vesicle-mediated transport Hs biological process
eye photoreceptor cell development Hs biological process

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
photoreceptor inner segment Hs cellular component 244 2.76e-79
retinol dehydrogenase activity Hs molecular function 256 5.28e-84
protein binding Hs molecular function 256 5.28e-84
intracellular Hs cellular component 256 5.28e-84
nucleus Hs cellular component 258 1.47e-84
mitochondrion Hs cellular component 258 1.47e-84
lysosomal membrane Hs cellular component 258 1.47e-84
endoplasmic reticulum Hs cellular component 258 1.47e-84
endoplasmic reticulum membrane Hs cellular component 258 1.47e-84
alcohol dehydrogenase (NADP+) activity Hs molecular function 258 1.47e-84
membrane Hs cellular component 258 1.47e-84
integral component of membrane Hs cellular component 244 2.76e-79
oxidoreductase activity Hs molecular function 258 1.47e-84
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Hs molecular function 244 2.76e-79
NADP-retinol dehydrogenase activity Hs molecular function 258 1.47e-84
photoreceptor inner segment membrane Hs cellular component 256 5.28e-84

GO (InterProScan)

No result

GO Term Analysis Type e-value

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