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GENE CARD

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Gene Card

Best human hits

SPSB1; SPSB2; SPSB4

Species

P.mammillata

Unique Gene ID

Phmamm.g00011394

Gene Model ID

Phmamm.CG.MTP2014.S708.g11394

Location

S708:77457..78767

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S708.g11394.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

31 results

AHC0AAA31YO08

Plate: Plate_31_O08

AHC0AAA31YO11

Plate: Plate_31_O11

AHC0AAA34YD21

Plate: Plate_34_D21

AHC0AAA42YB10

Plate: Plate_42_B10

AHC0AAA48YM22

Plate: Plate_48_M22

AHC0AAA57YE14

Plate: Plate_57_E14

AHC0AAA61YK24

Plate: Plate_61_K24

AHC0AAA79YA22

Plate: Plate_79_A22

AHC0AAA110YM08

Plate: Plate_110_M08

AHC0AAA129YA11

Plate: Plate_129_A11

AHC0AAA132YC19

Plate: Plate_132_C19

AHC0AAA135YM24

Plate: Plate_135_M24

AHC0AAA148YG15

Plate: Plate_148_G15

AHC0AAA151YM09

Plate: Plate_151_M09

AHC0AAA153YH17

Plate: Plate_153_H17

AHC0AAA93YJ20

Plate: Plate_93_J20

AHC0AAA98YO13

Plate: Plate_98_O13

AHC0AAA162YL16

Plate: Plate_162_L16

AHC0AAA163YG10

Plate: Plate_163_G10

AHC0AAA183YK08

Plate: Plate_183_K08

AHC0AAA187YG16

Plate: Plate_187_G16

AHC0AAA189YP12

Plate: Plate_189_P12

AHC0AAA211YP15

Plate: Plate_211_P15

AHC0AAA224YI06

Plate: Plate_224_I06

AHC0AAA228YH23

Plate: Plate_228_H23

AHC0AAA235YK13

Plate: Plate_235_K13

AHC0AAA236YJ22

Plate: Plate_236_J22

AHC0AAA253YK22

Plate: Plate_253_K22

AHC0AAA260YO14

Plate: Plate_260_O14

AHC0AAA264YP23

Plate: Plate_264_P23

AHC0AAA98YA11

Plate: Plate_98_A11

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
SOCS_box Pfam SOCS box domain
SPRY_dom SMART SPRY domain
B30.2/SPRY ProSiteProfiles B30.2/SPRY domain
SOCS_box ProSiteProfiles SOCS box domain
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
SOCS_box SMART SOCS box domain
SOCS_box-like_dom_sf SUPERFAMILY SOCS box-like domain superfamily
SPRY_dom Pfam SPRY domain

GOSlim

8 results

GO Term Annotation Origin Type
protein polyubiquitination Orthology biological process
ubiquitin-protein transferase activity Orthology molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
cytosol Orthology cellular component
protein ubiquitination Orthology biological process
intracellular signal transduction Orthology biological process
cellular protein modification process Orthology biological process

GO (Orthology)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein polyubiquitination Hs biological process
ubiquitin-protein transferase activity Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
protein ubiquitination Hs biological process
intracellular signal transduction Hs biological process
post-translational protein modification Hs biological process

GO (Blast)

4 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ubiquitin-protein transferase activity Hs molecular function 332 2.84e-116
protein binding Hs molecular function 332 2.84e-116
cytoplasm Hs cellular component 332 2.84e-116
cytosol Hs cellular component 332 2.84e-116

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein binding SMART molecular function 1.1E-21
intracellular signal transduction SUPERFAMILY biological process 9.94E-5