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Gene Card

Best human hits

CEBPA; CEBPB; DBP

Species

P.mammillata

Unique Gene ID

Phmamm.g00011481

Gene Model ID

Phmamm.CG.MTP2014.S720.g11481

Location

S720:76249..77902

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S720.g11481.01.t
Phmamm.CG.MTP2014.S720.g11481.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

1 result

AHC0AAA211YJ13

Plate: Plate_211_J13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
bZIP SMART Basic-leucine zipper domain
bZIP ProSiteProfiles Basic-leucine zipper domain
bZIP Pfam Basic-leucine zipper domain

GOSlim

30 results

GO Term Annotation Origin Type
RNA polymerase II regulatory region sequence-specific DNA binding Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Blast molecular function
DNA binding Blast molecular function
chromatin binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
transcription coactivator activity Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
regulation of transcription, DNA-templated InterProScan biological process
transcription factor binding Blast molecular function
kinase binding Blast molecular function
protein homodimerization activity Blast molecular function
intracellular membrane-bounded organelle Blast cellular component
sequence-specific DNA binding Blast molecular function
transcription regulatory region DNA binding Blast molecular function
ubiquitin-like protein ligase binding Blast molecular function
protein heterodimerization activity Blast molecular function
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
intracellular part Blast cellular component
macromolecular complex Blast cellular component
enzyme binding Blast molecular function
receptor binding Blast molecular function
nuclear part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
condensed chromosome, centromeric region Hs cellular component 43.1 2.59e-04
nuclear chromatin Hs cellular component 43.1 2.59e-04
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 51.2 4.97e-07
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 46.2 2.45e-05
RNA polymerase II core promoter sequence-specific DNA binding Hs molecular function 43.1 2.59e-04
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 51.2 4.97e-07
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 51.2 4.97e-07
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 43.1 2.59e-04
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 46.2 2.45e-05
DNA binding Hs molecular function 51.2 4.97e-07
chromatin binding Hs molecular function 43.1 2.59e-04
transcription factor activity, sequence-specific DNA binding Hs molecular function 51.2 4.97e-07
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 46.2 2.45e-05
transcription coactivator activity Hs molecular function 46.2 2.45e-05
protein binding Hs molecular function 46.2 2.45e-05
nucleus Hs cellular component 51.2 4.97e-07
nucleoplasm Hs cellular component 46.2 2.45e-05
transcription factor complex Hs cellular component 46.2 2.45e-05
nucleolus Hs cellular component 46.2 2.45e-05
cytoplasm Hs cellular component 43.1 2.59e-04
transcription factor binding Hs molecular function 46.2 2.45e-05
nuclear matrix Hs cellular component 43.1 2.59e-04
kinase binding Hs molecular function 46.2 2.45e-05
histone acetyltransferase binding Hs molecular function 43.1 2.59e-04
glucocorticoid receptor binding Hs molecular function 43.1 2.59e-04
CHOP-C/EBP complex Hs cellular component 43.1 2.59e-04
protein homodimerization activity Hs molecular function 46.2 2.45e-05
histone deacetylase binding Hs molecular function 43.1 2.59e-04
intracellular membrane-bounded organelle Hs cellular component 46.2 2.45e-05
sequence-specific DNA binding Hs molecular function 46.2 2.45e-05
transcription regulatory region DNA binding Hs molecular function 46.2 2.45e-05
ubiquitin-like protein ligase binding Hs molecular function 43.1 2.59e-04
protein heterodimerization activity Hs molecular function 43.1 2.59e-04
RNA polymerase II transcription factor complex Hs cellular component 46.2 2.45e-05

GO (InterProScan)

2 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding PANTHER molecular function 1.1E-14
regulation of transcription, DNA-templated Pfam biological process 1.6E-9

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