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GENE CARD

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Gene Card

Best human hits

BCL6; ZBTB14; ZNF556

Species

P.mammillata

Unique Gene ID

Phmamm.g00011603

Gene Model ID

Phmamm.CG.MTP2014.S737.g11603

Location

S737:37146..46633

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S737.g11603.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

9 results

AHC0AAA6YI24

Plate: Plate_6_I24

AHC0AAA46YP22

Plate: Plate_46_P22

AHC0AAA111YC01

Plate: Plate_111_C01

AHC0AAA114YH19

Plate: Plate_114_H19

AHC0AAA122YC12

Plate: Plate_122_C12

AHC0AAA230YL14

Plate: Plate_230_L14

AHC0AAA232YA14

Plate: Plate_232_A14

AHC0AAA239YK22

Plate: Plate_239_K22

AHC0AAA256YC03

Plate: Plate_256_C03

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type Pfam Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

22 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Blast biological process
RNA polymerase II regulatory region sequence-specific DNA binding Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
chromatin binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
Golgi apparatus Blast cellular component
cytosol Blast cellular component
identical protein binding Blast molecular function
sequence-specific DNA binding Blast molecular function
transcription regulatory region DNA binding Blast molecular function
metal ion binding Blast molecular function
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
intracellular part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 104 3.62e-23
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 102 8.61e-23
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 104 3.62e-23
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 102 8.61e-23
intronic transcription regulatory region sequence-specific DNA binding Hs molecular function 104 3.62e-23
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 104 3.62e-23
nucleic acid binding Hs molecular function 104 3.62e-23
DNA binding Hs molecular function 104 3.62e-23
chromatin binding Hs molecular function 104 3.62e-23
transcription factor activity, sequence-specific DNA binding Hs molecular function 104 3.62e-23
protein binding Hs molecular function 104 3.62e-23
intracellular Hs cellular component 100 1.79e-22
nucleus Hs cellular component 104 3.62e-23
nucleoplasm Hs cellular component 104 3.62e-23
replication fork Hs cellular component 104 3.62e-23
nucleolus Hs cellular component 102 8.61e-23
Golgi apparatus Hs cellular component 104 3.62e-23
cytosol Hs cellular component 102 8.61e-23
aggresome Hs cellular component 102 8.61e-23
chromatin DNA binding Hs molecular function 104 3.62e-23
identical protein binding Hs molecular function 104 3.62e-23
sequence-specific DNA binding Hs molecular function 104 3.62e-23
transcription regulatory region DNA binding Hs molecular function 102 8.61e-23
metal ion binding Hs molecular function 104 3.62e-23

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 5.6E-4