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GENE CARD

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Gene Card

Best human hits

HIST1H2AD; HIST1H2AE; HIST3H2A

Species

P.mammillata

Unique Gene ID

Phmamm.g00019219

Gene Model ID

Phmamm.CG.MTP2014.S7467.g19219

Location

S7467:968..1256

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S7467.g19219.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Histone-fold Gene3D Histone-fold
Histone-fold SUPERFAMILY Histone-fold
Histone_H2A PRINTS Histone H2A
Histone_H2A SMART Histone H2A
Histone_H2A CDD Histone H2A
Histone_H2A/H2B/H3 Pfam Histone H2A/H2B/H3
Histone_H2A_CS ProSitePatterns Histone H2A conserved site

GOSlim

24 results

GO Term Annotation Origin Type
DNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
negative regulation of cell proliferation Orthology biological process
protein heterodimerization activity Orthology molecular function
extracellular exosome Orthology cellular component
nucleoplasm Orthology cellular component
centrosome Orthology cellular component
DNA repair Orthology biological process
cellular response to DNA damage stimulus Orthology biological process
cell cycle Orthology biological process
spermatogenesis Orthology biological process
nuclear speck Orthology cellular component
enzyme binding Orthology molecular function
intracellular organelle part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component
nuclear lumen Orthology cellular component
organelle organization Orthology biological process
negative regulation of transcription, DNA-templated Orthology biological process
DNA metabolic process Orthology biological process
brain development Orthology biological process
reproductive process Orthology biological process
cellular response to stress Orthology biological process

GO (Orthology)

45 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleosome Hs cellular component
nuclear nucleosome Hs cellular component
nuclear chromatin Hs cellular component
DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
chromosome Hs cellular component
nucleosome disassembly Hs biological process
chromatin silencing Hs biological process
negative regulation of cell proliferation Hs biological process
protein heterodimerization activity Hs molecular function
extracellular exosome Hs cellular component
UV-damage excision repair Hs biological process
DNA damage checkpoint Hs biological process
double-strand break repair via homologous recombination Hs biological process
chromosome, telomeric region Hs cellular component
nuclear chromosome, telomeric region Hs cellular component
chromatin Hs cellular component
condensed nuclear chromosome Hs cellular component
male germ cell nucleus Hs cellular component
XY body Hs cellular component
damaged DNA binding Hs molecular function
nucleoplasm Hs cellular component
replication fork Hs cellular component
centrosome Hs cellular component
DNA repair Hs biological process
double-strand break repair Hs biological process
double-strand break repair via nonhomologous end joining Hs biological process
DNA recombination Hs biological process
chromatin organization Hs biological process
nucleosome assembly Hs biological process
cellular response to DNA damage stimulus Hs biological process
cell cycle Hs biological process
spermatogenesis Hs biological process
response to ionizing radiation Hs biological process
viral process Hs biological process
nuclear speck Hs cellular component
enzyme binding Hs molecular function
cerebral cortex development Hs biological process
site of double-strand break Hs cellular component
histone binding Hs molecular function
positive regulation of DNA repair Hs biological process
meiotic cell cycle Hs biological process
cellular response to gamma radiation Hs biological process
cellular senescence Hs biological process

GO (Blast)

9 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleosome Hs cellular component 175 2.40e-58
nuclear nucleosome Hs cellular component 175 2.40e-58
nuclear chromatin Hs cellular component 174 3.84e-58
DNA binding Hs molecular function 175 2.40e-58
protein binding Hs molecular function 175 2.40e-58
nucleus Hs cellular component 175 2.40e-58
chromosome Hs cellular component 175 2.40e-58
protein heterodimerization activity Hs molecular function 175 2.40e-58
extracellular exosome Hs cellular component 175 2.40e-58

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleosome CDD cellular component 4.78923E-52
DNA binding CDD molecular function 4.78923E-52
nucleus CDD cellular component 4.78923E-52
protein heterodimerization activity Gene3D molecular function 1.8E-51