Aniseed - Gene card

Gene Card

Best human hits

C19orf47; MRPL51

Species

P.mammillata

Unique Gene ID

Phmamm.g00011730

Gene Model ID

Phmamm.CG.MTP2014.S756.g11730

Location

S756:59223..62643

Transcript Models and Sequences

Phmamm.CG.MTP2014.S756.g11730.01.t
Phmamm.CG.MTP2014.S756.g11730.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

47 results

AHC0AAA98YG09

Plate: Plate_98_G09

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
SAM/pointed_sf	SUPERFAMILY	Sterile alpha motif/pointed domain superfamily
Ribosomal_L51_mit	Pfam	Ribosomal protein L51, mitochondrial

GOSlim

7 results

GO Term	Annotation Origin	Type
structural constituent of ribosome	Blast	molecular function
protein binding	Orthology	molecular function
nucleoplasm	Orthology	cellular component
mitochondrion	Blast	cellular component
mitochondrial inner membrane	Blast	cellular component
ribosome	Blast	cellular component
mitochondrial matrix	Blast	cellular component

GO (Orthology)

2 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
nucleoplasm	Hs	cellular component

GO (Blast)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
structural constituent of ribosome	Hs	molecular function	40.4	3.55e-04
protein binding	Hs	molecular function	86.7	2.72e-18
nucleoplasm	Hs	cellular component	86.7	2.72e-18
mitochondrion	Hs	cellular component	40.4	3.55e-04
mitochondrial inner membrane	Hs	cellular component	40.4	3.55e-04
mitochondrial ribosome	Hs	cellular component	40.4	3.55e-04
mitochondrial large ribosomal subunit	Hs	cellular component	40.4	3.55e-04
ribosome	Hs	cellular component	40.4	3.55e-04
intracellular ribonucleoprotein complex	Hs	cellular component	40.4	3.55e-04

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
structural constituent of ribosome	Pfam	molecular function	2.1E-8