Aniseed - Gene card

Gene Card

Best human hits

UBE2D2; UBE2F; UBE2M

Species

P.mammillata

Unique Gene ID

Phmamm.g00011735

Gene Model ID

Phmamm.CG.MTP2014.S757.g11735

Location

S757:2403..5761

Transcript Models and Sequences

Phmamm.CG.MTP2014.S757.g11735.01.t
Phmamm.CG.MTP2014.S757.g11735.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

1 result

AHC0AAA48YH11

Plate: Plate_48_H11

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
UBQ-conjugating_AS	ProSitePatterns	Ubiquitin-conjugating enzyme, active site
UBQ-conjugating_enzyme/RWD	SUPERFAMILY	Ubiquitin-conjugating enzyme/RWD-like
UBQ-conjugat_E2	CDD	Ubiquitin-conjugating enzyme E2
UBQ-conjugat_E2	ProSiteProfiles	Ubiquitin-conjugating enzyme E2
UBQ-conjugat_E2	Pfam	Ubiquitin-conjugating enzyme E2
UBQ-conjugating_enzyme/RWD	Gene3D	Ubiquitin-conjugating enzyme/RWD-like

GOSlim

21 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
ubiquitin-protein transferase activity	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
cellular protein modification process	Orthology	biological process
protein ubiquitination	Orthology	biological process
transferase activity	Orthology	molecular function
ubiquitin protein ligase binding	Blast	molecular function
macromolecular complex	Blast	cellular component
extracellular exosome	Orthology	cellular component
cell surface receptor signaling pathway	Orthology	biological process
cellular response to organic substance	Orthology	biological process
ubiquitin-like protein transferase activity	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
intracellular signal transduction	Orthology	biological process
positive regulation of apoptotic process	Orthology	biological process
protein modification by small protein conjugation	Orthology	biological process
intracellular part	Blast	cellular component

GO (Orthology)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
ubiquitin-protein transferase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
cellular protein modification process	Hs	biological process
transforming growth factor beta receptor signaling pathway	Hs	biological process
protein ubiquitination	Hs	biological process
transferase activity	Hs	molecular function
NEDD8 transferase activity	Hs	molecular function
NIK/NF-kappaB signaling	Hs	biological process
positive regulation of neuron apoptotic process	Hs	biological process
post-translational protein modification	Hs	biological process
protein neddylation	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin ligase complex	Hs	cellular component	100	1.23e-27
nucleotide binding	Hs	molecular function	301	5.12e-106
ubiquitin-protein transferase activity	Hs	molecular function	301	5.12e-106
protein binding	Hs	molecular function	301	5.12e-106
ATP binding	Hs	molecular function	301	5.12e-106
nucleoplasm	Hs	cellular component	301	5.12e-106
cytoplasm	Hs	cellular component	301	5.12e-106
cytosol	Hs	cellular component	301	5.12e-106
transferase activity	Hs	molecular function	301	5.12e-106
NEDD8 transferase activity	Hs	molecular function	301	5.12e-106
ubiquitin protein ligase binding	Hs	molecular function	119	2.54e-34
macromolecular complex	Hs	cellular component	100	1.23e-27
ubiquitin protein ligase activity	Hs	molecular function	119	2.54e-34
ubiquitin conjugating enzyme activity	Hs	molecular function	100	1.23e-27
extracellular exosome	Hs	cellular component	301	5.12e-106

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value