Gene Card
Best human hits
RPL13
Species
Unique Gene ID
Phmamm.g00011890
Gene Model ID
Phmamm.CG.MTP2014.S778.g11890
Location
S778:6190..8824
Transcript Models and Sequences
Phmamm.CG.MTP2014.S778.g11890.01.t
Phmamm.CG.MTP2014.S778.g11890.02.t
Phmamm.CG.MTP2014.S778.g11890.03.t
Genoscope Yasuo Villefranche
3 results
AHC0AAA154YD24
Plate: Plate_154_D24
AHC0AAA222YJ06
Plate: Plate_222_J06
AHC0AAA250YP15
Plate: Plate_250_P15
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
4 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Ribosomal_L13e | PANTHER | Ribosomal protein L13e |
| Ribosomal_L13e | Hamap | Ribosomal protein L13e |
| Ribosomal_L13e | Pfam | Ribosomal protein L13e |
| Ribosomal_L13e_CS | ProSitePatterns | Ribosomal protein L13e, conserved site |
GOSlim
15 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Orthology | biological process |
| RNA binding | Orthology | molecular function |
| structural constituent of ribosome | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| intracellular | Orthology | cellular component |
| nucleus | Orthology | cellular component |
| nucleolus | Orthology | cellular component |
| endoplasmic reticulum | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| ribosome | Orthology | cellular component |
| translational initiation | Orthology | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Orthology | biological process |
| membrane | Orthology | cellular component |
| RNA processing | Orthology | biological process |
| intracellular organelle part | Orthology | cellular component |
GO (Orthology)
18 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Hs | biological process |
| RNA binding | Hs | molecular function |
| structural constituent of ribosome | Hs | molecular function |
| protein binding | Hs | molecular function |
| intracellular | Hs | cellular component |
| nucleus | Hs | cellular component |
| nucleolus | Hs | cellular component |
| endoplasmic reticulum | Hs | cellular component |
| cytosol | Hs | cellular component |
| ribosome | Hs | cellular component |
| rRNA processing | Hs | biological process |
| translation | Hs | biological process |
| translational initiation | Hs | biological process |
| SRP-dependent cotranslational protein targeting to membrane | Hs | biological process |
| membrane | Hs | cellular component |
| cytosolic large ribosomal subunit | Hs | cellular component |
| cytosolic ribosome | Hs | cellular component |
| intracellular ribonucleoprotein complex | Hs | cellular component |
GO (Blast)
13 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA binding | Hs | molecular function | 254 | 1.56e-86 |
| structural constituent of ribosome | Hs | molecular function | 254 | 1.56e-86 |
| protein binding | Hs | molecular function | 254 | 1.56e-86 |
| intracellular | Hs | cellular component | 254 | 1.56e-86 |
| nucleus | Hs | cellular component | 254 | 1.56e-86 |
| nucleolus | Hs | cellular component | 254 | 1.56e-86 |
| endoplasmic reticulum | Hs | cellular component | 254 | 1.56e-86 |
| cytosol | Hs | cellular component | 254 | 1.56e-86 |
| ribosome | Hs | cellular component | 254 | 1.56e-86 |
| membrane | Hs | cellular component | 254 | 1.56e-86 |
| cytosolic large ribosomal subunit | Hs | cellular component | 254 | 1.56e-86 |
| cytosolic ribosome | Hs | cellular component | 254 | 1.56e-86 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 254 | 1.56e-86 |
GO (InterProScan)
4 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| structural constituent of ribosome | Pfam | molecular function | 1.0E-81 |
| intracellular | Pfam | cellular component | 1.0E-81 |
| ribosome | Pfam | cellular component | 1.0E-81 |
| translation | Pfam | biological process | 1.0E-81 |
