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GENE CARD

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Gene Card

Best human hits

ZNF280D; ZNF598

Species

P.mammillata

Unique Gene ID

Phmamm.g00012211

Gene Model ID

Phmamm.CG.MTP2014.S826.g12211

Location

S826:54779..63935

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

11 results

AHC0AAA7YH12

Plate: Plate_7_H12

AHC0AAA36YH09

Plate: Plate_36_H09

AHC0AAA80YO20

Plate: Plate_80_O20

AHC0AAA88YE23

Plate: Plate_88_E23

AHC0AAA169YI09

Plate: Plate_169_I09

AHC0AAA194YF24

Plate: Plate_194_F24

AHC0AAA211YH18

Plate: Plate_211_H18

AHC0AAA221YO11

Plate: Plate_221_O11

AHC0AAA227YI03

Plate: Plate_227_I03

AHC0AAA229YE15

Plate: Plate_229_E15

AHC0AAA249YA04

Plate: Plate_249_A04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_RING ProSiteProfiles Zinc finger, RING-type
UIM_dom ProSiteProfiles Ubiquitin interacting motif
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

4 results

GO Term Annotation Origin Type
nucleic acid binding Orthology molecular function
DNA binding Blast molecular function
nucleus Blast cellular component
metal ion binding Blast molecular function

GO (Orthology)

1 result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function

GO (Blast)

4 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 288 2.22e-84
DNA binding Hs molecular function 40.0 0.006
nucleus Hs cellular component 40.0 0.006
metal ion binding Hs molecular function 40.0 0.006

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 6.5