Aniseed - Gene card

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Genoscope Yasuo Villefranche

3 results

AHC0AAA97YB22

Plate: Plate_97_B22

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Helicase_ATP-bd	SMART	Helicase superfamily 1/2, ATP-binding domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
ATP-dep_Helicase_C	Pfam	ATP-dependent helicase, C-terminal
DEAD_2	Pfam	DEAD2
Helicase-like_DEXD_c2	SMART	Helicase-like, DEXD box c2 type
Helic_SF1/SF2_ATP-bd_DinG/Rad3	ProSiteProfiles	Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type
ATP-dep_Helicase_C	SMART	ATP-dependent helicase, C-terminal

GOSlim

23 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Blast	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Blast	cellular component
nucleobase-containing compound metabolic process	Orthology	biological process
DNA replication	Orthology	biological process
DNA repair	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
hydrolase activity	Orthology	molecular function
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	Orthology	molecular function
nuclear membrane	Blast	cellular component
metal ion binding	Orthology	molecular function
DNA metabolic process	Orthology	biological process
organelle organization	Orthology	biological process
intracellular organelle part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
nucleoside-triphosphatase activity	Orthology	molecular function
cofactor binding	Orthology	molecular function

GO (Orthology)

27 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
telomere maintenance	Hs	biological process
strand displacement	Hs	biological process
chromosome, telomeric region	Hs	cellular component
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
ATP-dependent DNA helicase activity	Hs	molecular function
helicase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleobase-containing compound metabolic process	Hs	biological process
DNA replication	Hs	biological process
DNA repair	Hs	biological process
DNA recombination	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
ATP-dependent helicase activity	Hs	molecular function
regulation of double-strand break repair via homologous recombination	Hs	biological process
hydrolase activity	Hs	molecular function
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	Hs	molecular function
replication fork processing	Hs	biological process
DNA duplex unwinding	Hs	biological process
negative regulation of DNA recombination	Hs	biological process
metal ion binding	Hs	molecular function
iron-sulfur cluster binding	Hs	molecular function
4 iron, 4 sulfur cluster binding	Hs	molecular function

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	366	1.01e-110
chromosome, telomeric region	Hs	cellular component	365	7.41e-111
nucleic acid binding	Hs	molecular function	366	1.01e-110
DNA binding	Hs	molecular function	366	1.01e-110
chromatin binding	Hs	molecular function	154	9.82e-39
ATP-dependent DNA helicase activity	Hs	molecular function	366	1.01e-110
helicase activity	Hs	molecular function	366	1.01e-110
protein binding	Hs	molecular function	365	7.41e-111
ATP binding	Hs	molecular function	366	1.01e-110
nucleus	Hs	cellular component	366	1.01e-110
nucleoplasm	Hs	cellular component	365	7.41e-111
cytoplasm	Hs	cellular component	154	9.82e-39
ATP-dependent helicase activity	Hs	molecular function	366	1.01e-110
hydrolase activity	Hs	molecular function	366	1.01e-110
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	Hs	molecular function	366	1.01e-110
nuclear membrane	Hs	cellular component	154	9.82e-39
metal ion binding	Hs	molecular function	366	1.01e-110
iron-sulfur cluster binding	Hs	molecular function	366	1.01e-110
4 iron, 4 sulfur cluster binding	Hs	molecular function	366	1.01e-110

GO (InterProScan)

7 results

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	3.2E-54
DNA binding	Pfam	molecular function	7.1E-52
ATP-dependent DNA helicase activity	SMART	molecular function	6.4E-66
ATP binding	SMART	molecular function	3.2E-54
nucleobase-containing compound metabolic process	SMART	biological process	3.2E-54
ATP-dependent helicase activity	SMART	molecular function	3.2E-54
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	SMART	molecular function	6.4E-66

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