Login
Help

GENE CARD

Submit your Data

  1. > 
  2. > 

Gene Card

Best human hits

FDPS; GGPS1; PDSS1

Species

P.mammillata

Unique Gene ID

Phmamm.g00002823

Gene Model ID

Phmamm.CG.MTP2014.S85.g02823

Location

S85:111573..112704

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S85.g02823.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

13 results

AHC0AAA45YI02

Plate: Plate_45_I02

AHC0AAA74YL21

Plate: Plate_74_L21

AHC0AAA145YO11

Plate: Plate_145_O11

AHC0AAA156YO21

Plate: Plate_156_O21

AHC0AAA89YA23

Plate: Plate_89_A23

AHC0AAA172YF15

Plate: Plate_172_F15

AHC0AAA179YO02

Plate: Plate_179_O02

AHC0AAA235YB07

Plate: Plate_235_B07

AHC0AAA239YL14

Plate: Plate_239_L14

AHC0AAA240YH11

Plate: Plate_240_H11

AHC0AAA242YP02

Plate: Plate_242_P02

AHC0AAA254YH19

Plate: Plate_254_H19

AHC0AAA267YD02

Plate: Plate_267_D02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Isoprenoid_synthase_dom_sf SUPERFAMILY Isoprenoid synthase domain superfamily
Polyprenyl_synt_CS ProSitePatterns Polyprenyl synthetase, conserved site
Isoprenoid_synthase_dom_sf Gene3D Isoprenoid synthase domain superfamily
Polyprenyl_synt Pfam Polyprenyl synthetase

GOSlim

33 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
protein binding Orthology molecular function
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
mitochondrion Blast cellular component
mitochondrial matrix Blast cellular component
cytosol Orthology cellular component
membrane Orthology cellular component
integral component of membrane Blast cellular component
transferase activity Blast molecular function
identical protein binding Blast molecular function
metal ion binding Blast molecular function
protein heterodimerization activity Blast molecular function
protein polyubiquitination Orthology biological process
actin binding Orthology molecular function
nucleus Orthology cellular component
endosome Orthology cellular component
early endosome Orthology cellular component
Golgi apparatus Orthology cellular component
cytoskeleton Orthology cellular component
microtubule Orthology cellular component
plasma membrane Orthology cellular component
positive regulation of signal transduction Orthology biological process
microtubule cytoskeleton Orthology cellular component
cell junction Orthology cellular component
cytoplasmic vesicle Orthology cellular component
synapse Orthology cellular component
postsynaptic membrane Orthology cellular component
organelle Orthology cellular component
postsynapse Orthology cellular component
neuron part Orthology cellular component
macromolecular complex Blast cellular component
cellular biosynthetic process InterProScan biological process

GO (Orthology)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
membrane Hs cellular component
protein polyubiquitination Hs biological process
actin binding Hs molecular function
SH3/SH2 adaptor activity Hs molecular function
nucleus Hs cellular component
endosome Hs cellular component
early endosome Hs cellular component
Golgi apparatus Hs cellular component
cytoskeleton Hs cellular component
microtubule Hs cellular component
plasma membrane Hs cellular component
positive regulation of signal transduction Hs biological process
postsynaptic density Hs cellular component
microtubule cytoskeleton Hs cellular component
cell junction Hs cellular component
cytoplasmic vesicle Hs cellular component
synapse Hs cellular component
postsynaptic membrane Hs cellular component

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
trans-hexaprenyltranstransferase activity Hs molecular function 37.0 0.009
RNA binding Hs molecular function 287 5.82e-96
dimethylallyltranstransferase activity Hs molecular function 287 5.82e-96
farnesyltranstransferase activity Hs molecular function 43.1 6.49e-05
geranyltranstransferase activity Hs molecular function 287 5.82e-96
protein binding Hs molecular function 43.1 6.49e-05
nucleoplasm Hs cellular component 287 5.82e-96
cytoplasm Hs cellular component 287 5.82e-96
mitochondrion Hs cellular component 287 5.82e-96
mitochondrial matrix Hs cellular component 37.0 0.009
cytosol Hs cellular component 287 5.82e-96
membrane Hs cellular component 287 5.82e-96
integral component of membrane Hs cellular component 287 5.82e-96
transferase activity Hs molecular function 287 5.82e-96
identical protein binding Hs molecular function 43.1 6.49e-05
metal ion binding Hs molecular function 287 5.82e-96
protein heterodimerization activity Hs molecular function 37.0 0.009
trans-octaprenyltranstransferase activity Hs molecular function 37.0 0.009
transferase complex Hs cellular component 37.0 0.009

GO (InterProScan)

2 results

GO Term Analysis Type e-value
dimethylallyltranstransferase activity PANTHER molecular function 1.0E-102
isoprenoid biosynthetic process Pfam biological process 1.7E-73

Back to Top