Gene Card
Best human hits
ATG5; BMS1; TSR1
Species
Unique Gene ID
Phmamm.g00012391
Gene Model ID
Phmamm.CG.MTP2014.S855.g12391
Location
S855:15532..23665
Transcript Models and Sequences
Phmamm.CG.MTP2014.S855.g12391.01.t
Phmamm.CG.MTP2014.S855.g12391.02.t
AHC0AAA24YI13
Plate: Plate_24_I13
AHC0AAA26YH04
Plate: Plate_26_H04
AHC0AAA62YC01
Plate: Plate_62_C01
AHC0AAA146YL07
Plate: Plate_146_L07
AHC0AAA147YA18
Plate: Plate_147_A18
AHC0AAA147YC20
Plate: Plate_147_C20
AHC0AAA181YK09
Plate: Plate_181_K09
AHC0AAA183YG03
Plate: Plate_183_G03
AHC0AAA212YN23
Plate: Plate_212_N23
AHC0AAA248YH20
Plate: Plate_248_H20
AHC0AAA258YH15
Plate: Plate_258_H15
AHC0AAA262YP20
Plate: Plate_262_P20
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

IPR Term | Analysis | Definition |
---|---|---|
BMS1_TSR1_C | SMART | Ribosome biogenesis protein BMS1/TSR1, C-terminal |
G_Bms1/Tsr1_dom | ProSiteProfiles | Bms1/Tsr1-type G domain |
AARP2CN | SMART | AARP2CN |
BMS1_TSR1_C | Pfam | Ribosome biogenesis protein BMS1/TSR1, C-terminal |
AARP2CN | Pfam | AARP2CN |
Atg5 | Pfam | Autophagy-related protein 5 |
GO Term | Annotation Origin | Type |
---|---|---|
nucleotide binding | Blast | molecular function |
RNA binding | Orthology | molecular function |
GTPase activity | Orthology | molecular function |
protein binding | Blast | molecular function |
ATP binding | Blast | molecular function |
GTP binding | Orthology | molecular function |
nucleus | Orthology | cellular component |
nucleoplasm | Orthology | cellular component |
nucleolus | Orthology | cellular component |
cytoplasm | Blast | cellular component |
cytosol | Orthology | cellular component |
membrane | Blast | cellular component |
RNA processing | Orthology | biological process |
macromolecular complex | Orthology | cellular component |
vacuole | Blast | cellular component |
cell projection part | Blast | cellular component |
microtubule | Blast | cellular component |
cytoplasmic part | Blast | cellular component |
plasma membrane region | Blast | cellular component |
transferase activity | Blast | molecular function |
intracellular organelle part | Blast | cellular component |
whole membrane | Blast | cellular component |
cytoplasmic vesicle | Blast | cellular component |
bounding membrane of organelle | Blast | cellular component |
organelle part | Blast | cellular component |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|---|---|
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Hs | biological process |
endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Hs | biological process |
RNA binding | Hs | molecular function |
GTPase activity | Hs | molecular function |
GTP binding | Hs | molecular function |
nucleus | Hs | cellular component |
nucleoplasm | Hs | cellular component |
nucleolus | Hs | cellular component |
cytosol | Hs | cellular component |
rRNA processing | Hs | biological process |
preribosome, small subunit precursor | Hs | cellular component |
U3 snoRNA binding | Hs | molecular function |
ribosome biogenesis | Hs | biological process |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
nucleotide binding | Hs | molecular function | 90.9 | 1.83e-18 |
RNA binding | Hs | molecular function | 607 | 0.0 |
GTPase activity | Hs | molecular function | 607 | 0.0 |
protein binding | Hs | molecular function | 155 | 2.52e-42 |
ATP binding | Hs | molecular function | 90.9 | 1.83e-18 |
GTP binding | Hs | molecular function | 607 | 0.0 |
nucleus | Hs | cellular component | 607 | 0.0 |
nucleoplasm | Hs | cellular component | 607 | 0.0 |
nucleolus | Hs | cellular component | 607 | 0.0 |
cytoplasm | Hs | cellular component | 155 | 2.52e-42 |
autophagosome | Hs | cellular component | 155 | 2.52e-42 |
cytosol | Hs | cellular component | 607 | 0.0 |
axoneme | Hs | cellular component | 155 | 2.52e-42 |
membrane | Hs | cellular component | 155 | 2.52e-42 |
Atg8 ligase activity | Hs | molecular function | 155 | 2.52e-42 |
phagocytic vesicle membrane | Hs | cellular component | 155 | 2.52e-42 |
90S preribosome | Hs | cellular component | 90.9 | 1.83e-18 |
preribosome, small subunit precursor | Hs | cellular component | 607 | 0.0 |
pre-autophagosomal structure membrane | Hs | cellular component | 155 | 2.52e-42 |
Atg12-Atg5-Atg16 complex | Hs | cellular component | 155 | 2.52e-42 |
U3 snoRNA binding | Hs | molecular function | 607 | 0.0 |
ER-mitochondrion membrane contact site | Hs | cellular component | 155 | 2.52e-42 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
nucleus | SMART | cellular component | 6.8E-23 |
cytoplasm | Pfam | cellular component | 3.4E-22 |
autophagy | Pfam | biological process | 3.4E-22 |
ribosome biogenesis | PANTHER | biological process | 3.8E-248 |