Aniseed - Gene card

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Genoscope Yasuo Villefranche

49 results

AHC0AAA39YM02

Plate: Plate_39_M02

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Znf_XPA_CS	Pfam	Zinc finger, XPA-type, conserved site
XPA_sf	Gene3D	XPA domain superfamily
DNA-bd_dom_put_sf	SUPERFAMILY	Putative DNA-binding domain superfamily
Fringe-like	Pfam	Fringe-like
XPA	TIGRFAM	XPA
XPA_C	Pfam	XPA, C-terminal

GOSlim

21 results

GO Term	Annotation Origin	Type
Golgi membrane	Blast	cellular component
DNA binding	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
DNA repair	InterProScan	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
transferase activity	Orthology	molecular function
protein homodimerization activity	Blast	molecular function
metal ion binding	Blast	molecular function
organic substance metabolic process	Orthology	biological process
cellular protein modification process	Orthology	biological process
nuclear part	Blast	cellular component
macromolecular complex	Blast	cellular component
nucleoplasm part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
extracellular region part	Blast	cellular component

GO (Orthology)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
carbohydrate metabolic process	Hs	biological process
fucose metabolic process	Hs	biological process
protein glycosylation	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
transferase activity	Hs	molecular function
transferase activity, transferring glycosyl groups	Hs	molecular function
protein O-linked fucosylation	Hs	biological process

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide-excision repair factor 1 complex	Hs	cellular component	186	9.16e-54
Golgi membrane	Hs	cellular component	54.3	1.17e-07
DNA binding	Hs	molecular function	186	9.16e-54
damaged DNA binding	Hs	molecular function	186	9.16e-54
protein binding	Hs	molecular function	186	9.16e-54
nucleus	Hs	cellular component	186	9.16e-54
nucleoplasm	Hs	cellular component	186	9.16e-54
DNA replication factor A complex	Hs	cellular component	186	9.16e-54
cytoplasm	Hs	cellular component	186	9.16e-54
endoplasmic reticulum	Hs	cellular component	353	3.71e-114
endoplasmic reticulum membrane	Hs	cellular component	353	3.71e-114
membrane	Hs	cellular component	353	3.71e-114
integral component of membrane	Hs	cellular component	353	3.71e-114
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity	Hs	molecular function	54.3	1.17e-07
transferase activity	Hs	molecular function	353	3.71e-114
transferase activity, transferring glycosyl groups	Hs	molecular function	353	3.71e-114
protein domain specific binding	Hs	molecular function	186	9.16e-54
protein homodimerization activity	Hs	molecular function	186	9.16e-54
intercellular bridge	Hs	cellular component	186	9.16e-54
metal ion binding	Hs	molecular function	186	9.16e-54

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
damaged DNA binding	TIGRFAM	molecular function	8.8E-50
nucleus	TIGRFAM	cellular component	8.8E-50
nucleotide-excision repair	TIGRFAM	biological process	8.8E-50
membrane	Pfam	cellular component	1.1E-44
transferase activity, transferring glycosyl groups	Pfam	molecular function	1.1E-44

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