Gene Card
Best human hits
CSMD1; CSMD2; CSMD3
Species
Unique Gene ID
Phmamm.g00012612
Gene Model ID
Phmamm.CG.MTP2014.S888.g12612
Location
S888:43381..54370
Transcript Models and Sequences
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
15 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Trypsin_dom | SMART | Serine proteases, trypsin domain |
| TRYPSIN_SER | ProSitePatterns | Serine proteases, trypsin family, serine active site |
| Sushi_SCR_CCP_dom | CDD | Sushi/SCR/CCP domain |
| Sushi_SCR_CCP_dom | ProSiteProfiles | Sushi/SCR/CCP domain |
| Peptidase_S1_PA | SUPERFAMILY | Peptidase S1, PA clan |
| Sushi/SCR/CCP_sf | SUPERFAMILY | Sushi/SCR/CCP superfamily |
| VWF_A | Pfam | von Willebrand factor, type A |
| VWF_A | ProSiteProfiles | von Willebrand factor, type A |
| Sushi_SCR_CCP_dom | SMART | Sushi/SCR/CCP domain |
| Peptidase_S1A | PRINTS | Peptidase S1A, chymotrypsin family |
| Trypsin_dom | ProSiteProfiles | Serine proteases, trypsin domain |
| vWFA_dom_sf | Gene3D | von Willebrand factor A-like domain superfamily |
| vWFA_dom_sf | SUPERFAMILY | von Willebrand factor A-like domain superfamily |
| Sushi_SCR_CCP_dom | Pfam | Sushi/SCR/CCP domain |
| Trypsin_dom | Pfam | Serine proteases, trypsin domain |
GOSlim
5 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| plasma membrane | Blast | cellular component |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| serine-type endopeptidase activity | InterProScan | molecular function |
| proteolysis | InterProScan | biological process |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
3 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| plasma membrane | Hs | cellular component | 87.0 | 1.98e-17 |
| membrane | Hs | cellular component | 87.0 | 1.98e-17 |
| integral component of membrane | Hs | cellular component | 87.0 | 1.98e-17 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| serine-type endopeptidase activity | SMART | molecular function | 2.1E-19 |
| proteolysis | SMART | biological process | 2.1E-19 |
