Aniseed - Gene card

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Genoscope Yasuo Villefranche

2 results

AHC0AAA266YC24

Plate: Plate_266_C24

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Znf_C2H2_type	SMART	Zinc finger C2H2-type
Znf_C2H2_type	Pfam	Zinc finger C2H2-type
Znf_C2H2_type	ProSitePatterns	Zinc finger C2H2-type
Znf_C2H2_sf	SUPERFAMILY	Zinc finger C2H2 superfamily
Znf_C2H2_type	ProSiteProfiles	Zinc finger C2H2-type

GOSlim

35 results

GO Term	Annotation Origin	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Blast	molecular function
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
nervous system development	Orthology	biological process
nuclear body	Blast	cellular component
cell differentiation	Orthology	biological process
sequence-specific DNA binding	Blast	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
nuclear speck	Orthology	cellular component
transcription regulatory region DNA binding	Orthology	molecular function
animal organ development	Orthology	biological process
regulation of molecular function	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
organelle	Orthology	cellular component
cell projection	Orthology	cellular component
plasma membrane region	Orthology	cellular component
macromolecular complex	Orthology	cellular component
protein localization to organelle	Orthology	biological process
chromatin binding	Blast	molecular function

GO (Orthology)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
nervous system development	Hs	biological process
cell differentiation	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
kidney development	Hs	biological process
nuclear speck	Hs	cellular component
negative regulation of sequence-specific DNA binding transcription factor activity	Hs	biological process
transcription regulatory region DNA binding	Hs	molecular function
negative regulation of smoothened signaling pathway	Hs	biological process
non-motile cilium	Hs	cellular component
positive regulation of protein localization to nucleus	Hs	biological process

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	279	1.43e-88
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	279	1.43e-88
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	273	1.71e-86
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	279	1.43e-88
nucleic acid binding	Hs	molecular function	279	1.43e-88
DNA binding	Hs	molecular function	279	1.43e-88
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	279	1.43e-88
protein binding	Hs	molecular function	279	1.43e-88
nucleus	Hs	cellular component	279	1.43e-88
nucleoplasm	Hs	cellular component	279	1.43e-88
cytoplasm	Hs	cellular component	279	1.43e-88
nuclear body	Hs	cellular component	272	2.27e-85
chromatin DNA binding	Hs	molecular function	272	2.27e-85
sequence-specific DNA binding	Hs	molecular function	279	1.43e-88
metal ion binding	Hs	molecular function	279	1.43e-88

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	4.9E-5

Gene Card

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Transcript Models and Sequences