Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

RPL7; RPL7L1

Species

P.mammillata

Unique Gene ID

Phmamm.g00002948

Gene Model ID

Phmamm.CG.MTP2014.S90.g02948

Location

S90:136624..142653

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

8 results

AHC0AAA113YD08

Plate: Plate_113_D08

AHC0AAA122YJ20

Plate: Plate_122_J20

AHC0AAA92YL20

Plate: Plate_92_L20

AHC0AAA93YK23

Plate: Plate_93_K23

AHC0AAA165YO02

Plate: Plate_165_O02

AHC0AAA172YB16

Plate: Plate_172_B16

AHC0AAA217YL06

Plate: Plate_217_L06

AHC0AAA92YL18

Plate: Plate_92_L18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
L30_ferredoxin-like_sf SUPERFAMILY Ribosomal protein L30, ferredoxin-like fold domain superfamily
L30_ferredoxin-like_sf Gene3D Ribosomal protein L30, ferredoxin-like fold domain superfamily
Ribosomal_L7_euk TIGRFAM Ribosomal protein L7, eukaryotic
Ribosomal_L30_ferredoxin-like Pfam Ribosomal protein L30, ferredoxin-like fold domain
Ribosomal_L30_CS ProSitePatterns Ribosomal protein L30, conserved site
Ribosomal_L30_N Pfam Ribosomal protein L30, N-terminal
Ribosomal_L7_euk_arc CDD Ribosomal protein L7, eukaryotic/archaeal
Ribosomal_L30_central_dom_arc Gene3D Ribosomal protein L30, central domain, archaeal type

GOSlim

18 results

GO Term Annotation Origin Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Orthology biological process
DNA binding Orthology molecular function
RNA binding Orthology molecular function
structural constituent of ribosome Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleolus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
ribosome Orthology cellular component
focal adhesion Orthology cellular component
translational initiation Orthology biological process
SRP-dependent cotranslational protein targeting to membrane Orthology biological process
membrane Orthology cellular component
protein homodimerization activity Orthology molecular function
extracellular exosome Orthology cellular component
RNA processing Orthology biological process
intracellular organelle part Orthology cellular component

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Hs biological process
cytoplasmic translation Hs biological process
DNA binding Hs molecular function
RNA binding Hs molecular function
mRNA binding Hs molecular function
structural constituent of ribosome Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
ribosome Hs cellular component
focal adhesion Hs cellular component
rRNA processing Hs biological process
translation Hs biological process
translational initiation Hs biological process
SRP-dependent cotranslational protein targeting to membrane Hs biological process
membrane Hs cellular component
cytosolic large ribosomal subunit Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
ribosomal large subunit biogenesis Hs biological process
protein homodimerization activity Hs molecular function
extracellular exosome Hs cellular component

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
DNA binding Hs molecular function 325 2.87e-113
RNA binding Hs molecular function 325 2.87e-113
mRNA binding Hs molecular function 325 2.87e-113
structural constituent of ribosome Hs molecular function 325 2.87e-113
protein binding Hs molecular function 325 2.87e-113
nucleus Hs cellular component 325 2.87e-113
nucleolus Hs cellular component 325 2.87e-113
cytoplasm Hs cellular component 325 2.87e-113
cytosol Hs cellular component 325 2.87e-113
ribosome Hs cellular component 325 2.87e-113
focal adhesion Hs cellular component 325 2.87e-113
membrane Hs cellular component 325 2.87e-113
cytosolic large ribosomal subunit Hs cellular component 325 2.87e-113
intracellular ribonucleoprotein complex Hs cellular component 325 2.87e-113
protein homodimerization activity Hs molecular function 325 2.87e-113
extracellular exosome Hs cellular component 325 2.87e-113

GO (InterProScan)

No result

GO Term Analysis Type e-value