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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S9...'

Gene Card

Best human hits

GATAD1

Species

P.mammillata

Unique Gene ID

Phmamm.g00012816

Gene Model ID

Phmamm.CG.MTP2014.S926.g12816

Location

S926:55532..56204

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S926.g12816.01.t

External Database Gene Card

External database links

No result

Collections
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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Znf_GATA ProSiteProfiles Zinc finger, GATA-type
Znf_NHR/GATA Gene3D Zinc finger, NHR/GATA-type

GOSlim

11 results

GO Term Annotation Origin Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
zinc ion binding Orthology molecular function
sequence-specific DNA binding Orthology molecular function
metal ion binding Orthology molecular function
organelle organization Orthology biological process
DNA binding Orthology molecular function

GO (Orthology)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
zinc ion binding Hs molecular function
chromatin assembly Hs biological process
sequence-specific DNA binding Hs molecular function
metal ion binding Hs molecular function

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 156 3.43e-47
transcription factor activity, sequence-specific DNA binding Hs molecular function 156 3.43e-47
nucleus Hs cellular component 156 3.43e-47
nucleoplasm Hs cellular component 156 3.43e-47
zinc ion binding Hs molecular function 156 3.43e-47
sequence-specific DNA binding Hs molecular function 156 3.43e-47
metal ion binding Hs molecular function 156 3.43e-47

GO (InterProScan)

4 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding ProSiteProfiles molecular function 11.609
regulation of transcription, DNA-templated Gene3D biological process 8.0E-6
zinc ion binding Gene3D molecular function 8.0E-6
sequence-specific DNA binding ProSiteProfiles molecular function 11.609