Aniseed - Gene card

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Genoscope Yasuo Villefranche

2 results

AHC0AAA257YJ13

Plate: Plate_257_J13

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

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Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Histone-fold	SUPERFAMILY	Histone-fold
Histone-fold	Gene3D	Histone-fold
CBFA_NFYB_domain	Pfam	Transcription factor CBF/NF-Y/archaeal histone domain
Transcrpt_fac_NFYB/HAP3_CS	ProSitePatterns	Transcription factor, NFYB/HAP3, conserved site

GOSlim

24 results

GO Term	Annotation Origin	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcription corepressor activity	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription factor binding	Orthology	molecular function
transferase activity	Blast	molecular function
sequence-specific DNA binding	Orthology	molecular function
transcription regulatory region DNA binding	Orthology	molecular function
positive regulation of transcription, DNA-templated	Orthology	biological process
protein heterodimerization activity	Orthology	molecular function
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
nuclear part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
transferase activity, transferring phosphorus-containing groups	Blast	molecular function
DNA metabolic process	Blast	biological process
nucleoplasm part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
nuclear lumen	Blast	cellular component

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
CCAAT-binding factor complex	Hs	cellular component
protein-DNA complex	Hs	cellular component
sequence-specific DNA binding	Hs	molecular function
transcription regulatory region DNA binding	Hs	molecular function
positive regulation of transcription, DNA-templated	Hs	biological process
protein heterodimerization activity	Hs	molecular function
repressing transcription factor binding	Hs	molecular function
RNA polymerase II transcription factor complex	Hs	cellular component

GO (Blast)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	192	1.71e-60
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	192	1.71e-60
DNA binding	Hs	molecular function	192	1.71e-60
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	192	1.71e-60
transcription corepressor activity	Hs	molecular function	71.6	7.87e-15
DNA-directed DNA polymerase activity	Hs	molecular function	68.2	5.93e-14
protein binding	Hs	molecular function	192	1.71e-60
nucleus	Hs	cellular component	192	1.71e-60
nucleoplasm	Hs	cellular component	192	1.71e-60
Ada2/Gcn5/Ada3 transcription activator complex	Hs	cellular component	71.6	7.87e-15
transcription factor binding	Hs	molecular function	71.6	7.87e-15
epsilon DNA polymerase complex	Hs	cellular component	68.2	5.93e-14
CCAAT-binding factor complex	Hs	cellular component	192	1.71e-60
transferase activity	Hs	molecular function	68.2	5.93e-14
nucleotidyltransferase activity	Hs	molecular function	68.2	5.93e-14
TBP-class protein binding	Hs	molecular function	71.6	7.87e-15
protein-DNA complex	Hs	cellular component	192	1.71e-60
sequence-specific DNA binding	Hs	molecular function	192	1.71e-60
transcription regulatory region DNA binding	Hs	molecular function	192	1.71e-60
protein heterodimerization activity	Hs	molecular function	192	1.71e-60
repressing transcription factor binding	Hs	molecular function	192	1.71e-60
RNA polymerase II transcription factor complex	Hs	cellular component	192	1.71e-60

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
nucleus	ProSitePatterns	cellular component
regulation of transcription, DNA-templated	ProSitePatterns	biological process
sequence-specific DNA binding	ProSitePatterns	molecular function
protein heterodimerization activity	Gene3D	molecular function	2.2E-43

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