Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

NLRP1; NLRP7; NOD1

Species

P.mammillata

Unique Gene ID

Phmamm.g00019428

Gene Model ID

Phmamm.CG.MTP2014.S9310.g19428

Location

S9310:23..1016

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S9310.g19428.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
NACHT_NTPase Pfam NACHT nucleoside triphosphatase
NACHT_NTPase ProSiteProfiles NACHT nucleoside triphosphatase
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase

GOSlim

22 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
basolateral plasma membrane Blast cellular component
apical plasma membrane Blast cellular component
enzyme binding Blast molecular function
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
endopeptidase activity Blast molecular function
enzyme activator activity Blast molecular function
positive regulation of hydrolase activity Blast biological process
positive regulation of apoptotic process Blast biological process
enzyme regulator activity Blast molecular function
carbohydrate derivative binding Blast molecular function
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 53.5 1.01e-07
protein binding Hs molecular function 53.5 1.01e-07
ATP binding Hs molecular function 53.5 1.01e-07
intracellular Hs cellular component 50.1 1.41e-06
nucleus Hs cellular component 50.1 1.41e-06
nucleoplasm Hs cellular component 50.1 1.41e-06
cytoplasm Hs cellular component 53.5 1.01e-07
cytosol Hs cellular component 53.5 1.01e-07
plasma membrane Hs cellular component 53.5 1.01e-07
cysteine-type endopeptidase activator activity involved in apoptotic process Hs molecular function 53.5 1.01e-07
membrane Hs cellular component 53.5 1.01e-07
basolateral plasma membrane Hs cellular component 53.5 1.01e-07
apical plasma membrane Hs cellular component 53.5 1.01e-07
aspartic-type endopeptidase inhibitor activity Hs molecular function 41.6 5.75e-04
enzyme binding Hs molecular function 50.1 1.41e-06
protein domain specific binding Hs molecular function 50.1 1.41e-06
interleukin-1 binding Hs molecular function 41.6 5.75e-04
identical protein binding Hs molecular function 53.5 1.01e-07
protein homodimerization activity Hs molecular function 53.5 1.01e-07
peptidoglycan binding Hs molecular function 53.5 1.01e-07
CARD domain binding Hs molecular function 53.5 1.01e-07
inflammasome complex Hs cellular component 50.1 1.41e-06
NLRP1 inflammasome complex Hs cellular component 50.1 1.41e-06
caspase binding Hs molecular function 41.6 5.75e-04

GO (InterProScan)

No result

GO Term Analysis Type e-value