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GENE CARD

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Gene Card

Best human hits

NLRC3; NLRP8; NOD1

Species

P.mammillata

Unique Gene ID

Phmamm.g00013023

Gene Model ID

Phmamm.CG.MTP2014.S965.g13023

Location

S965:31261..36008

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S965.g13023.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Leu-rich_rpt Pfam Leucine-rich repeat
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily

GOSlim

19 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
cytoplasm Blast cellular component
microtubule organizing center Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
basolateral plasma membrane Blast cellular component
apical plasma membrane Blast cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
perinuclear region of cytoplasm Blast cellular component
endopeptidase activity Blast molecular function
enzyme activator activity Blast molecular function
positive regulation of hydrolase activity Blast biological process
enzyme binding Blast molecular function
positive regulation of apoptotic process Blast biological process
carbohydrate derivative binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 53.1 2.27e-07
protein binding Hs molecular function 53.1 2.27e-07
ATP binding Hs molecular function 53.1 2.27e-07
cytoplasm Hs cellular component 53.1 2.27e-07
microtubule organizing center Hs cellular component 50.4 1.75e-06
cytosol Hs cellular component 50.4 1.75e-06
plasma membrane Hs cellular component 50.1 2.03e-06
cysteine-type endopeptidase activator activity involved in apoptotic process Hs molecular function 50.1 2.03e-06
membrane Hs cellular component 50.1 2.03e-06
basolateral plasma membrane Hs cellular component 50.1 2.03e-06
apical plasma membrane Hs cellular component 50.1 2.03e-06
phosphatidylinositol 3-kinase regulatory subunit binding Hs molecular function 50.4 1.75e-06
identical protein binding Hs molecular function 50.1 2.03e-06
protein homodimerization activity Hs molecular function 50.1 2.03e-06
peptidoglycan binding Hs molecular function 50.1 2.03e-06
perinuclear region of cytoplasm Hs cellular component 50.4 1.75e-06
CARD domain binding Hs molecular function 50.1 2.03e-06

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 0.085