Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 679

>Phfumi.CG.MTP2014.S10006.g08500.01.p
AFGGQKASYGKKTELSIIEQRQSLPIYKLKDQLVQAVEDNQVLIVIGETGSGKTTQITQY
IAEAGYTIRGKIGCTQPRRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTSQETKIKYM
TDGMMLRECLIDFDLSQYSVIMLDEAHERTIHTDVLFGLLKKCVQKRKDLKLIVTSATLD
AVKFSEYFFGAPIFTIPGRTFPVEIMYTKDPEPDYLDASLITVMQIHLTEPPGDILLFLT
GQEEIDTACEILFERMKSLGGDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI
AETSLTIDGIHYVVDPGFVKQNVYNSKTGIDQLVVTPISQAQAKQRAGRGGRTGPGKCYR
LYTERAYRDEMLATAVPELQRTNLASTVLSLKAMGINDLLSFDFMDPPPMETLVTAMEQL
YQLSALDDEGLLTRLGRRMAEFPLDPMLCKMLIMSVHLSCSEEILTVVSMLSVQNVFYRP
KEKQTLADQKKAKFHQNEGDHLTLLSVYNSWKNNKFSNPWCFENFIQARTLRRAQDVRKQ
MLGIMDRHKLDVVTCGKKITMIQKAILSGFFRNAAKKDPQEGYRTLVDQQVVYIHPSSAL
FNRQPEWIVYHELVLTTKEYMREVTAIDPKWLVEFAPKFFKMGDPTKLSKQKKQMRLEPL
YNRYEEPNSWRISRAYRRR

Nucleotide sequence

Length: 2,040

>Phfumi.CG.MTP2014.S10006.g08500.01.t
GCCTTTGGTGGACAAAAAGCCTCATATGGAAAGAAAACTGAACTCTCAATTATTGAACAA
AGACAAAGTTTACCTATTTATAAACTAAAGGATCAGCTTGTGCAAGCAGTGGAAGACAAT
CAGGTACTGATTGTTATTGGTGAAACTGGTTCGGGAAAAACAACACAGATCACACAGTAC
ATTGCAGAGGCAGGGTACACGATCCGGGGTAAAATTGGCTGCACGCAACCAAGAAGAGTA
GCAGCTATGTCTGTTGCAAAACGTGTGTCTGAAGAATTTGGCTGTCGACTAGGCCAAGAA
GTCGGATACACGATTCGATTTGAGGACTGCACCAGCCAGGAAACCAAAATTAAATACATG
ACAGATGGTATGATGCTTCGTGAGTGCCTTATTGACTTTGACCTGTCACAGTACTCTGTA
ATTATGCTGGATGAGGCCCATGAAAGGACAATTCACACTGATGTGTTGTTTGGCTTACTG
AAAAAGTGTGTACAAAAGCGCAAAGACCTTAAGTTAATTGTCACCTCAGCAACTTTGGAT
GCAGTGAAATTCTCAGAGTACTTTTTTGGTGCTCCAATTTTTACTATACCAGGCCGAACA
TTTCCAGTGGAGATTATGTACACCAAGGATCCAGAACCAGACTACTTAGATGCCTCACTG
ATCACTGTGATGCAAATTCATCTAACAGAACCCCCTGGTGACATTCTGCTATTTCTTACT
GGTCAGGAAGAAATTGACACTGCCTGTGAAATCCTATTTGAACGAATGAAGTCACTTGGA
GGTGATGTACCAGAACTAATCATTTTACCAGTATATTCAGCATTGCCATCAGAAATGCAA
ACTCGCATTTTCGATCCTGCTCCACCAGGTAGCCGTAAGGTTGTTATTGCCACAAATATT
GCAGAAACATCTTTGACGATTGATGGCATTCATTATGTTGTCGACCCTGGATTTGTTAAG
CAGAATGTTTACAACAGCAAAACAGGTATTGACCAGCTAGTGGTGACTCCAATATCACAA
GCTCAGGCCAAACAAAGGGCTGGAAGAGGGGGCAGGACTGGTCCTGGTAAATGCTACAGG
TTGTACACTGAAAGGGCCTACAGGGATGAAATGTTGGCTACTGCAGTACCAGAGCTGCAA
CGGACTAATCTTGCATCCACAGTGCTTTCATTAAAGGCTATGGGCATTAATGATCTGCTT
TCATTCGACTTTATGGATCCACCCCCAATGGAAACATTAGTAACAGCCATGGAACAACTG
TACCAGCTAAGTGCACTTGATGATGAAGGACTTTTAACTCGTCTTGGGCGGAGAATGGCT
GAGTTTCCCCTTGACCCAATGCTGTGCAAAATGCTAATCATGTCGGTCCACTTGTCATGC
AGTGAGGAAATCTTGACTGTGGTCTCTATGCTTTCAGTTCAGAATGTGTTTTACAGGCCA
AAGGAAAAGCAAACACTTGCTGATCAGAAAAAGGCCAAGTTTCACCAAAACGAGGGTGAC
CATTTAACCTTACTGTCTGTGTACAACTCATGGAAGAACAACAAATTTAGCAATCCTTGG
TGCTTTGAGAACTTTATTCAGGCTAGAACACTCCGTCGGGCTCAAGATGTCAGAAAACAG
ATGCTGGGTATCATGGACCGACACAAGTTGGATGTTGTTACCTGTGGAAAAAAGATCACA
ATGATACAGAAAGCCATTCTTAGTGGATTTTTCCGGAATGCAGCCAAAAAGGATCCTCAA
GAGGGTTACAGAACCTTGGTTGATCAACAAGTGGTGTACATCCATCCCAGCAGCGCTTTG
TTTAACAGGCAACCCGAATGGATTGTTTATCATGAACTTGTGCTCACCACCAAGGAATAC
ATGAGAGAGGTAACAGCCATTGATCCCAAGTGGCTGGTTGAGTTTGCACCAAAGTTTTTT
AAAATGGGCGACCCGACGAAGCTTAGCAAACAAAAGAAGCAGATGCGCTTGGAGCCGTTG
TACAACCGATACGAAGAGCCAAACTCGTGGCGTATTTCCAGAGCATATCGCAGGAGATAA

InterProScan

SUPERFAMILY	P-loop_NTPase (IPR027417) - T[20-636] 1.41E-136
SMART	Helicase_ATP-bd (IPR014001) - T[22-206] 2.7E-33
Pfam	DEAD/DEAH_box_helicase_dom (IPR011545) - T[32-180] 1.6E-7
ProSiteProfiles	Helicase_ATP-bd (IPR014001) - T[34-197] 19.318
ProSitePatterns	DNA/RNA_helicase_DEAH_CS (IPR002464) - T[139-148] .
CDD	Helicase_C (IPR001650) - T[204-361] 9.83178E-13
ProSiteProfiles	Helicase_C (IPR001650) - T[215-395] 17.251
Pfam	Helicase_C (IPR001650) - T[226-354] 2.5E-13
SMART	Helicase_C (IPR001650) - T[250-354] 1.6E-19
SMART	Helicase-assoc_dom (IPR007502) - T[415-505] 1.7E-38
Pfam	Helicase-assoc_dom (IPR007502) - T[416-504] 4.6E-24
Pfam	DUF1605 (IPR011709) - T[562-638] 7.6E-26