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TRANSCRIPT CARD

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  1. Clone 'cien178101'
  2. Clone 'cieg063k02'
  3. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S1004.g03113.01.t

Possible name(s)

SH3RF1; SH3RF2; SH3RF3

Location

S1004 [49 / 6,482]

Sequences

Amino acid sequence

Length: 557

>Phfumi.CG.MTP2014.S1004.g03113.01.p
VIVPLPTEQPLCVALYDFESKNEAKDRDCLTFAKNEKIVAIRRVDENWAEGVCKDKIGIF
PLSFVKLNDEAKKLLDIKDQPSVESNDNIRPNPQRSVSGGAAARRIISNKQGQKQTKKRH
SFPTFHAGKAKDGEPTTSHRHSMEILDTVDTSLVMPTNNSAIMATTSLSAPSTASAAPAL
NAGELVVRLRQKRPTEISVPPTVTPTEHTKLPVLCKMDPNKLPAARSSSEGNRPSRNENT
SSTDRSKLTDRQTPRASNTARILAAAKMVIATYSYKAAKPDELELIKGDSYQLTEVCNDG
WCRGRHIISGKVGVFPGNYVKPLTSVPVTRTSPVATRSSSGSVSSSSSSSSSPSQPPRHS
RNSEPSNHQHNVIGQQRPSSSSAIRRTPPPRPAAPTSQASNHQSTSKPGTSSGSGPSPTT
PRLHIPAGKSGNGRKTADKDKKRERGQLFLKMISAGAGKKTKSPTTPTSPTPRNVDNPPP
ANSPSTSQVKPTLKPLMRDKYKAVMNYPANSPEELELKEGDIIIVHHRRADGWFRGTHQK
NGRSGHFPSTFVERMPN

Nucleotide sequence

Length: 1,671

>Phfumi.CG.MTP2014.S1004.g03113.01.t
GTTATTGTACCCTTGCCTACTGAACAACCCCTTTGTGTGGCATTGTATGATTTTGAGTCG
AAAAATGAAGCTAAAGACCGGGATTGTTTGACCTTTGCCAAGAATGAAAAGATTGTTGCT
ATCAGGAGGGTGGATGAAAACTGGGCAGAAGGTGTTTGCAAAGACAAAATTGGTATTTTT
CCTCTTTCATTCGTGAAGTTAAATGATGAGGCGAAGAAACTCCTTGATATTAAAGACCAA
CCATCAGTGGAGAGCAATGACAACATTCGACCGAATCCCCAAAGATCAGTGAGTGGTGGA
GCTGCTGCACGGAGAATCATAAGCAATAAGCAAGGACAAAAACAAACTAAAAAAAGACAT
TCCTTTCCCACTTTTCATGCAGGGAAAGCAAAAGATGGTGAACCAACGACTTCACATCGT
CACTCCATGGAAATCCTTGACACTGTTGACACATCACTTGTCATGCCGACCAACAATTCT
GCCATTATGGCAACAACCAGCCTATCTGCACCATCCACTGCCTCTGCAGCACCAGCATTG
AATGCTGGTGAACTTGTTGTCCGTTTGCGACAAAAACGACCGACAGAAATTAGTGTTCCA
CCCACAGTAACACCAACTGAACATACTAAGCTCCCTGTCCTATGCAAAATGGATCCAAAC
AAATTACCTGCTGCTAGAAGTTCTTCGGAGGGAAATAGACCGTCACGCAATGAAAACACA
TCATCCACAGATCGCTCGAAACTAACGGATCGTCAAACCCCAAGAGCGTCAAACACAGCC
AGAATTTTGGCAGCTGCAAAAATGGTCATAGCCACCTATTCATACAAGGCAGCAAAACCA
GATGAGTTGGAACTTATTAAAGGGGATTCCTATCAACTGACCGAAGTCTGCAATGATGGT
TGGTGCCGGGGTCGTCACATCATTTCTGGCAAAGTTGGAGTATTTCCTGGCAATTATGTG
AAACCCCTTACATCAGTTCCTGTTACTAGAACTTCGCCGGTCGCAACTCGTTCCTCATCA
GGATCTGTTTCATCCTCTTCCTCGTCATCCTCATCCCCTTCACAACCTCCAAGACACTCA
AGAAATTCAGAACCTTCAAATCATCAACATAATGTTATTGGCCAACAAAGACCATCTTCA
TCATCAGCAATACGGCGAACTCCACCACCAAGGCCAGCTGCGCCAACATCGCAAGCGTCA
AATCACCAATCTACTTCCAAACCTGGTACGTCCTCGGGCTCGGGTCCTTCTCCTACCACA
CCGCGGTTACATATTCCGGCGGGCAAGTCGGGTAATGGAAGAAAAACCGCAGATAAGGAC
AAAAAGAGAGAAAGGGGACAACTTTTTCTGAAGATGATTTCTGCAGGCGCCGGAAAGAAG
ACGAAATCACCCACAACCCCAACAAGTCCAACACCGCGAAACGTCGACAACCCTCCCCCT
GCAAACTCCCCATCCACGTCACAAGTGAAGCCAACATTGAAACCACTTATGCGTGACAAG
TACAAGGCGGTGATGAACTACCCAGCCAACAGTCCGGAGGAGCTAGAACTCAAGGAGGGT
GATATTATTATCGTGCACCATCGACGAGCCGACGGCTGGTTCCGCGGGACTCACCAGAAG
AATGGTCGCAGTGGACACTTTCCCAGCACTTTTGTGGAAAGGATGCCGAAC

InterProScan

SUPERFAMILY
SH3-like_dom_sf (IPR036028) - T[6-70] 4.73E-15 - T[266-348] 7.61E-21 - T[476-555] 1.84E-17
ProSiteProfiles
SH3_domain (IPR001452) - T[7-70] 20.066 - T[264-325] 25.205 - T[496-557] 21.72
SMART
SH3_domain (IPR001452) - T[10-69] 1.9E-12 - T[267-324] 9.6E-18 - T[499-556] 1.7E-15
PRINTS
SH3_domain (IPR001452) - T[10-20] 5.1E-6 - T[281-296] 5.1E-6 - T[311-323] 5.1E-6
Pfam
SH3_domain (IPR001452) - T[13-61] 1.2E-7 - T[271-321] 1.7E-12 - T[502-549] 3.1E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SH3R3_HUMAN 32.471 % 155 3.34E-40
SH3R1_HUMAN 34.959 % 160 9.39E-42
SH3R2_HUMAN 52.564 % 88.6 2.05E-18