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TRANSCRIPT CARD

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  1. Clone 'ma007g22'
  2. Clone 'cilv019e24'
  3. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S10055.g08511.01.t

Possible name(s)

RPS3

Location

S10055 [3,206 / 5,602]

Sequences

Amino acid sequence

Length: 258

>Phfumi.CG.MTP2014.S10055.g08511.01.p
MATPISKKKKFVLDGLFKAELNELLWRELAEDGYSGVEVRVTPSRTEIIILATRTQNVLG
EKGRRIRELTSMVQKRFNFKDDTVELYAEKVANRGLCATAQCESLRYKLLGGLAVRRACY
GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVREYVDTAVRHVLLRQG
VLGIKVKIMLPWDPTGKIGPKKPLPDNVNIVEPKEEEPVTGPKSESKVAKVPEAMPGAPS
GMPMQAAGVPPGQAMPTQ

Nucleotide sequence

Length: 777

>Phfumi.CG.MTP2014.S10055.g08511.01.t
ATGGCGACGCCGATATCCAAGAAAAAGAAGTTTGTCCTCGACGGGCTTTTTAAAGCCGAG
TTAAACGAACTTTTGTGGAGGGAACTGGCCGAAGACGGCTACAGTGGTGTAGAGGTCCGT
GTCACCCCTTCCAGAACCGAGATCATTATTCTCGCCACACGAACACAAAATGTCCTCGGC
GAAAAAGGCCGTCGCATTCGGGAGTTGACTTCCATGGTCCAAAAACGGTTTAACTTCAAA
GACGACACAGTTGAGTTGTATGCTGAGAAGGTTGCCAACCGTGGTCTATGTGCAACAGCT
CAATGTGAATCCTTAAGATACAAACTACTTGGAGGTCTTGCTGTCAGAAGGGCATGCTAT
GGTGTACTTCGCTTCATCATGGAGTCTGGTGCTAAGGGTTGTGAAGTTGTGGTGTCTGGC
AAACTCCGTGGTCAGCGTGCCAAGTCCATGAAGTTTGTAGATGGTCTTATGATCCATTCT
GGTGACCCAGTCAGAGAATATGTTGACACCGCTGTGCGCCATGTTCTGCTTAGACAAGGT
GTGTTGGGCATCAAGGTTAAGATTATGTTACCATGGGATCCCACTGGCAAAATAGGGCCC
AAGAAGCCCCTGCCAGACAATGTGAACATTGTGGAACCGAAAGAAGAGGAACCTGTTACC
GGACCCAAGAGCGAGTCAAAGGTGGCCAAGGTCCCCGAAGCGATGCCCGGTGCCCCATCA
GGAATGCCCATGCAGGCAGCTGGCGTGCCCCCAGGCCAGGCTATGCCAACACAGTAA

InterProScan

Gene3D
KH_dom-like_a/b (IPR015946) - T[1-91] 2.1E-44
TIGRFAM
Ribosomal_S3_euk/arc (IPR005703) - T[8-212] 2.1E-70
SUPERFAMILY
KH_sf_prok-type (IPR009019) - T[10-99] 2.03E-24
ProSiteProfiles
KH_dom_type_2 (IPR004044) - T[21-92] 11.599
Pfam
KH_dom_type_2 (IPR004044) - T[21-93] 9.5E-11
Gene3D
Ribosomal_S3_C_sf (IPR036419) - T[93-235] 1.2E-71
SUPERFAMILY
Ribosomal_S3_C_sf (IPR036419) - T[93-192] 7.98E-28
Pfam
Ribosomal_S3_C (IPR001351) - T[106-188] 1.8E-23
ProSitePatterns
Ribosomal_S3_CS (IPR018280) - T[147-183] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS3_HUMAN 85.654 % 399 1.08E-142