Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S10055.g08511.03.t

Possible name(s)

RPS3

Gene model

Phfumi.CG.MTP2014.S10055.g08511

Location

S10055 [3,281 / 5,659]

Sequences

Amino acid sequence

Length: 253

>Phfumi.CG.MTP2014.S10055.g08511.03.p
QIQRLSKLLYSDLFPKAAEMATPISKKKKFVLDGLFKAELNELLWRELAEDGYSGVEVRV
TPSRTEIIILATRTQNVLGEKGRRIRELTSMVQKRFNFKDDTVELYAEKVANRGLCATAQ
CESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG
DPVREYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDNVNIVEPKEEEPVTG
PKSESKVAKVPEA

Nucleotide sequence

Length: 759

>Phfumi.CG.MTP2014.S10055.g08511.03.t
CAAATCCAACGCCTGTCTAAACTTCTTTACAGCGATCTCTTTCCCAAAGCTGCCGAAATG
GCGACGCCGATATCCAAGAAAAAGAAGTTTGTCCTCGACGGGCTTTTTAAAGCCGAGTTA
AACGAACTTTTGTGGAGGGAACTGGCCGAAGACGGCTACAGTGGTGTAGAGGTCCGTGTC
ACCCCTTCCAGAACCGAGATCATTATTCTCGCCACACGAACACAAAATGTCCTCGGCGAA
AAAGGCCGTCGCATTCGGGAGTTGACTTCCATGGTCCAAAAACGGTTTAACTTCAAAGAC
GACACAGTTGAGTTGTATGCTGAGAAGGTTGCCAACCGTGGTCTATGTGCAACAGCTCAA
TGTGAATCCTTAAGATACAAACTACTTGGAGGTCTTGCTGTCAGAAGGGCATGCTATGGT
GTACTTCGCTTCATCATGGAGTCTGGTGCTAAGGGTTGTGAAGTTGTGGTGTCTGGCAAA
CTCCGTGGTCAGCGTGCCAAGTCCATGAAGTTTGTAGATGGTCTTATGATCCATTCTGGT
GACCCAGTCAGAGAATATGTTGACACCGCTGTGCGCCATGTTCTGCTTAGACAAGGTGTG
TTGGGCATCAAGGTTAAGATTATGTTACCATGGGATCCCACTGGCAAAATAGGGCCCAAG
AAGCCCCTGCCAGACAATGTGAACATTGTGGAACCGAAAGAAGAGGAACCTGTTACCGGA
CCCAAGAGCGAGTCAAAGGTGGCCAAGGTCCCCGAAGCG

InterProScan

Gene3D	KH_dom-like_a/b (IPR015946) - T[16-110] 7.5E-45
TIGRFAM	Ribosomal_S3_euk/arc (IPR005703) - T[27-231] 2.0E-70
SUPERFAMILY	KH_sf_prok-type (IPR009019) - T[29-118] 1.93E-24
Pfam	KH_dom_type_2 (IPR004044) - T[40-112] 9.1E-11
ProSiteProfiles	KH_dom_type_2 (IPR004044) - T[40-111] 11.599
Gene3D	Ribosomal_S3_C_sf (IPR036419) - T[112-252] 1.3E-71
SUPERFAMILY	Ribosomal_S3_C_sf (IPR036419) - T[112-211] 7.59E-28
Pfam	Ribosomal_S3_C (IPR001351) - T[125-207] 1.7E-23
ProSitePatterns	Ribosomal_S3_CS (IPR018280) - T[166-202] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS3_HUMAN	86.522 %	398	3.22E-142