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  1. Clone 'cigd016m09' > 
  2. Clone 'cilv068o09' > 
  3. Clone 'cien161472' > 
  4. Clone 'ciem804b20' > 
  5. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S10178.g08536.01.t

Possible name(s)

DES; GFAP; VIM

Gene model

Phfumi.CG.MTP2014.S10178.g08536

Location

S10178 [187 / 5,856]

Sequences

Amino acid sequence

Length: 494

>Phfumi.CG.MTP2014.S10178.g08536.01.p
MSHQQSRRSYEERTSSYKRHFGDGPSRFTYKSKSPARKVSSSKTFRLSSSSSTGGAGPSR
MSGERVKVVRSTPVASGVTMRDINMMADTLGPDFQGMRVNEKEELQHLNSRFAGYITKVR
ALEQANRVLEAQVEQLSSSAPSRLADMYDEELNRLRREVDALTSQKENIQVQLENVAAEA
EKWKQKFDEEAATKREMEEDLNDMRKDCDDATLVRLDLERRLETLQEEIEFIKRMNEQEI
AELQEQIRNTEIKIESAPGPDLEELIDDMRVQYEKMAAKNRADAEQWYTEKVDNLQQQAS
RNDDALRAVRGEVSEYRKSVQTLNMEIDSLRGTNDSLQRTLGEMEDRYNRDTGDLQDTIS
NLQAECDDLKGQMAQHLRQYQELMDVKMALDIEIATYRKLLEGEESRVDAFGEERISDRV
SQMHVGTMKSGYVPLRKSYQKDDRLSRQDVDDVETVTTKKVVVKTIETKDGKVVSQTEDV
REQSSGDDHSHPTL

Nucleotide sequence

Length: 1,485

>Phfumi.CG.MTP2014.S10178.g08536.01.t
ATGTCGCATCAACAGTCGAGACGTTCGTACGAGGAGAGAACCTCAAGCTACAAGCGGCAT
TTCGGAGATGGACCGTCTCGTTTCACTTACAAATCAAAGTCACCAGCAAGGAAAGTGTCA
AGTTCAAAGACATTCAGATTGTCGAGCAGCTCATCAACGGGTGGGGCCGGCCCCAGTCGT
ATGTCGGGTGAGAGGGTGAAGGTCGTTAGGTCAACACCGGTTGCAAGTGGGGTAACAATG
CGAGACATTAACATGATGGCTGACACCCTTGGTCCGGACTTCCAGGGTATGAGGGTGAAC
GAGAAGGAAGAGTTGCAGCATTTGAATTCCCGGTTTGCAGGTTACATCACCAAGGTCCGC
GCCCTCGAACAGGCGAACCGAGTGTTGGAAGCCCAAGTCGAACAACTCAGCTCCTCGGCA
CCTTCAAGACTTGCTGATATGTACGATGAAGAGTTAAACAGACTTCGTCGTGAAGTTGAC
GCTTTGACGAGTCAGAAGGAAAATATCCAAGTTCAACTTGAGAACGTGGCTGCTGAGGCG
GAAAAGTGGAAACAAAAGTTTGATGAGGAAGCTGCAACGAAACGGGAAATGGAAGAGGAC
TTGAATGACATGCGCAAAGATTGCGATGATGCAACTCTTGTGAGGTTGGATCTTGAGAGG
AGACTTGAGACTCTGCAGGAAGAAATTGAATTCATCAAGAGAATGAATGAACAGGAAATC
GCCGAGCTTCAGGAACAAATTCGCAACACAGAAATCAAAATCGAGTCCGCTCCTGGTCCG
GATCTGGAGGAACTTATCGACGATATGAGAGTTCAGTATGAGAAGATGGCGGCCAAGAAC
AGAGCGGATGCTGAGCAGTGGTACACTGAGAAGGTTGACAACTTGCAACAGCAGGCTTCA
AGGAACGACGACGCACTTCGCGCTGTTCGCGGTGAAGTCAGCGAATACAGGAAGAGCGTT
CAGACTCTTAACATGGAAATTGACTCGCTCCGTGGAACTAACGATTCTCTGCAACGCACA
CTTGGTGAAATGGAAGATAGATACAACAGAGACACCGGGGATTTGCAAGATACTATCAGC
AACTTGCAGGCCGAATGCGACGACTTGAAGGGACAAATGGCGCAACACTTGCGTCAATAC
CAGGAGCTCATGGATGTCAAGATGGCGCTTGACATAGAAATCGCAACTTACAGAAAACTG
TTGGAAGGGGAGGAGTCGAGAGTCGATGCGTTTGGAGAAGAAAGAATCTCGGATCGCGTC
AGTCAAATGCATGTTGGAACAATGAAGTCTGGTTATGTTCCATTGAGAAAAAGTTACCAG
AAGGATGATCGTTTGTCACGTCAAGATGTTGATGACGTAGAGACAGTGACGACAAAGAAG
GTCGTGGTGAAAACTATTGAGACCAAGGACGGGAAGGTCGTCAGTCAGACCGAAGATGTT
CGTGAACAATCATCGGGAGACGACCACAGCCACCCGACCCTGTAA

InterProScan

PANTHER
IF (IPR001664) - T[40-488] 4.6E-136
PRINTS
Keratin_I (IPR002957) - T[197-220] 2.1E-15 - T[250-270] 2.1E-15 - T[322-337] 2.1E-15 - T[348-374] 2.1E-15
ProSitePatterns
Intermediate_filament_CS (IPR018039) - T[394-402] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VIME_HUMAN 41.542 % 345 1.67E-114
GFAP_HUMAN 37.36 % 292 2.22E-94
DESM_HUMAN 41.393 % 294 1.21E-94