- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1023.g03139.01.t
Possible name(s)
ALYREF; POLDIP3; TRA2A
Gene model
Location
S1023 [11,257 / 16,335]
Amino acid sequence
Length: 295
>Phfumi.CG.MTP2014.S1023.g03139.01.p
RMNTRKRVFKDARQKLNERDARAKLNQISVQSKLVLSRHRKAFDARNKLNTLSKLKTKEK
SFDARIKIQGNTAKPKPALKEKKKVVKFPLIKTLVINNSKETGTSRTIRNPSAIALKRKE
ENIKDFRKHKPTGFISVTNGSRVLLNKVTVEPAGMKIMVRNDAALVAKAPAKNQNAPNAE
KPERKGLRITMTNPDAIKENEIPVDMSSPFEGTKIIVSNLHPVVVEEDILELFSVLGPVR
RARLIGSGKAEIVFIRRDDAIRAYQKYNNRDLDGQPMRMKLLLQERAHQPAVKYS
Nucleotide sequence
Length: 888
>Phfumi.CG.MTP2014.S1023.g03139.01.t
AGAATGAATACAAGAAAGCGAGTGTTCAAAGACGCTCGGCAAAAACTGAATGAGCGGGAT
GCGAGAGCAAAACTGAATCAAATATCTGTGCAGAGCAAACTTGTCCTGTCTCGTCATCGC
AAAGCGTTCGATGCACGAAACAAACTGAACACTTTATCGAAGCTCAAAACGAAGGAAAAA
TCATTTGACGCACGAATTAAAATACAAGGAAATACAGCAAAGCCAAAACCTGCACTGAAG
GAAAAGAAAAAAGTTGTCAAATTTCCACTGATCAAAACACTTGTAATTAATAATTCAAAA
GAAACTGGAACATCACGCACAATTCGGAACCCATCTGCCATCGCGTTAAAGAGAAAAGAA
GAGAATATAAAAGATTTTCGAAAACACAAACCGACCGGGTTTATTTCTGTCACAAATGGA
TCGAGAGTGTTACTGAACAAGGTGACAGTAGAGCCAGCTGGTATGAAAATCATGGTGCGA
AACGATGCCGCCCTTGTTGCAAAAGCCCCAGCGAAAAATCAAAACGCACCCAATGCAGAG
AAACCTGAGCGAAAGGGATTAAGAATTACGATGACAAATCCAGACGCAATAAAGGAGAAT
GAAATTCCGGTTGATATGTCGAGTCCATTCGAGGGAACTAAAATCATCGTTTCAAATTTA
CACCCAGTTGTTGTTGAAGAAGATATCCTAGAACTTTTCAGTGTTCTTGGTCCGGTACGG
AGGGCGAGACTAATCGGATCAGGAAAGGCAGAGATAGTTTTCATCCGACGAGATGACGCC
ATCAGAGCTTATCAGAAGTACAACAACCGGGATTTGGACGGTCAACCGATGAGAATGAAG
CTGTTACTGCAGGAAAGAGCTCATCAACCCGCCGTAAAATACTCGTAA
| PANTHER |
PDIP3 (IPR034785) - T[10-284] 8.7E-51 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[160-290] 1.9E-12 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[203-286] 2.69E-15 |
| CDD |
PDIP3_RRM (IPR034784) - T[213-281] 3.79242E-35 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[213-284] 12.202 |
| SMART |
RRM_dom (IPR000504) - T[214-280] 3.4E-11 |
| Pfam |
RRM_dom (IPR000504) - T[215-277] 4.8E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PDIP3_HUMAN | 64.865 % | 111 | 5.92E-28 |