- Transcript 'Cisavi.CG.ENS81.R15....' >
- Transcript 'KH2012:KH.C10.570.v1...' >
- Region 'REG00000612' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1088.g03234.01.t
Possible name(s)
TRIM54; TRIM55; TRIM63
Gene model
Location
S1088 [16,753 / 20,174]
Amino acid sequence
Length: 568
>Phfumi.CG.MTP2014.S1088.g03234.01.p
MDALRVMTAGGGNLEEIERLLSCPICLEVYTKPVVILPCQHNLCRKCANDVFQNRGTPMG
SGGRFRCPTCRYEVVLDRHGVYGLQRNLLVENIIDMYQSENRKPNFKKAEVLMCEEHEEE
RVNIYCLTCQKPTCSLCKVFGQHQECDVSPMDSVYKDQKRELSDSIAVLVSGNDRMQAVI
SQTEELGKMTEANGRKAKSDLCETFDKLYAVLEDRKNTMMAKITSDVQERNQVLQEMLKT
YGKQLEGASKLMEASLGLLEERSVPQFLSLARETINKISEASRASDVRKPIFNIQNMDEF
KVNFDQQEATLRQLDFPDFQEECAVESRDDDDAHCSNSRPQVNANETGTETLVSESDDDD
EVTHEVVEVSVDSDETPGTSVTSRSDLGSVDDRRASVDGSVRSFSPTTSSRDGSNRRNGN
EEMPTIKRGRWYDLYVRQLPQPQYTDVSDSLAHLLSSTTTPAERESDALLKTSPDVDAYL
PMDNTEDDYDLYPVDKDNLSRRHRSVASLSLQASPQSSFERNESPPPLRRQRNVTNSSPT
RQPRQQRRPRSYPSHRRRTWSHLLDKKQ
Nucleotide sequence
Length: 1,707
>Phfumi.CG.MTP2014.S1088.g03234.01.t
ATGGACGCTTTACGCGTGATGACGGCTGGAGGCGGAAACCTTGAGGAAATCGAGCGCCTT
CTCTCGTGTCCGATCTGCTTGGAAGTTTACACCAAACCTGTGGTAATTCTGCCATGCCAG
CATAACCTCTGCCGAAAATGCGCCAACGACGTTTTTCAAAACAGGGGCACCCCCATGGGG
TCTGGTGGTCGATTCAGGTGTCCGACTTGTCGTTACGAGGTAGTGCTTGATCGTCATGGA
GTTTACGGACTACAGAGAAACTTGCTTGTGGAAAACATTATTGACATGTACCAATCCGAA
AACCGAAAGCCCAACTTTAAAAAGGCTGAGGTATTAATGTGTGAAGAGCATGAGGAGGAA
AGAGTGAACATATATTGCCTTACCTGCCAGAAGCCAACCTGTTCCTTGTGTAAAGTGTTT
GGACAACATCAAGAATGTGACGTGTCGCCTATGGACAGCGTTTACAAAGACCAGAAGAGA
GAACTGTCTGATTCGATCGCTGTTCTTGTGTCCGGAAACGACCGCATGCAAGCAGTTATC
AGCCAGACTGAAGAACTCGGAAAAATGACCGAAGCAAATGGACGAAAAGCAAAGAGCGAT
TTGTGTGAGACGTTTGACAAGCTATACGCGGTGCTGGAGGACAGAAAAAACACCATGATG
GCAAAAATAACCTCTGATGTGCAGGAACGCAATCAGGTTTTGCAAGAGATGCTAAAAACT
TACGGAAAACAACTGGAGGGCGCCAGCAAATTGATGGAAGCTTCTTTAGGATTACTGGAG
GAGCGAAGCGTCCCGCAATTTCTAAGTCTTGCGAGAGAAACTATAAACAAGATCAGTGAA
GCGTCACGTGCCTCTGACGTACGCAAGCCAATCTTTAACATTCAGAACATGGACGAGTTC
AAGGTCAATTTTGATCAACAAGAAGCAACGCTTCGACAACTTGACTTTCCCGATTTTCAA
GAAGAGTGCGCAGTCGAGTCACGTGACGATGATGACGCGCACTGCAGCAACTCGCGACCG
CAAGTAAATGCAAATGAGACGGGGACGGAAACCCTCGTGAGCGAATCAGACGACGACGAT
GAAGTGACGCATGAAGTTGTGGAAGTTTCGGTGGATTCTGACGAAACACCTGGTACGTCT
GTGACGTCACGAAGTGATTTGGGCAGTGTTGATGATCGTCGAGCATCCGTTGACGGATCT
GTTAGAAGTTTCTCACCTACCACGTCATCAAGAGACGGTAGCAATAGGAGAAATGGAAAC
GAAGAGATGCCGACAATTAAACGCGGCAGATGGTACGATCTCTATGTTCGCCAGCTTCCG
CAACCCCAATACACTGATGTTAGTGATTCGCTTGCTCACCTTTTGTCATCGACCACGACG
CCTGCAGAACGCGAAAGCGATGCTTTGCTTAAGACATCGCCGGATGTGGATGCATATCTG
CCAATGGACAACACAGAAGATGATTACGACTTATATCCTGTCGACAAGGATAATTTAAGT
CGACGTCACCGATCCGTGGCATCATTGTCCCTCCAGGCTTCGCCCCAAAGTTCTTTTGAA
CGCAACGAATCTCCGCCGCCGTTAAGACGTCAGCGAAACGTTACCAACAGTTCTCCGACC
CGCCAGCCCAGACAGCAGCGGCGCCCACGCTCCTACCCCAGCCACAGACGAAGAACTTGG
TCCCATCTGCTTGATAAGAAGCAGTAA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[8-101] 2.1E-19 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[23-68] 7.7E-11 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[23-71] 12.401 |
| SMART |
Znf_RING (IPR001841) - T[23-70] 9.6E-9 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[39-48] . |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[109-151] 11.69 |
| SMART |
Znf_B-box (IPR000315) - T[109-151] 3.2E-4 |
| Pfam |
Znf_B-box (IPR000315) - T[111-144] 3.4E-6 |
| CDD |
Znf_B-box (IPR000315) - T[113-151] 7.13075E-6 |
| ProSiteProfiles |
COS_domain (IPR017903) - T[259-317] 13.648 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRI54_HUMAN | 50.774 % | 342 | 6.49E-114 |
| TRI63_HUMAN | 46.914 % | 328 | 3.37E-108 |
| TRI55_HUMAN | 54.341 % | 357 | 5.72E-117 |