- Clone 'ciem846b06' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1088.g03234.02.t
Possible name(s)
TRIM54; TRIM55; TRIM63
Gene model
Location
S1088 [16,780 / 19,498]
Amino acid sequence
Length: 420
>Phfumi.CG.MTP2014.S1088.g03234.02.p
GGGNLEEIERLLSCPICLEVYTKPVVILPCQHNLCRKCANDVFQNRGTPMGSGGRFRCPT
CRYEVVLDRHGVYGLQRNLLVENIIDMYQSENRKPNFKKAEVLMCEEHEEERVNIYCLTC
QKPTCSLCKVFGQHQECDVSPMDSVYKDQKRELSDSIAVLVSGNDRMQAVISQTEELGKM
TEANGRKAKSDLCETFDKLYAVLEDRKNTMMAKITSDVQERNQVLQEMLKTYGKQLEGAS
KLMEASLGLLEERSVPQFLSLARETINKISEASRASDVRKPIFNIQNMDEFKVNFDQQEA
TLRQLDFPDFQEECAVESRDDDDAHCSNSRPQVNANETGTETLVSESDDDDEVTHEVVEV
SVDSDETPGTSVTSRSDLGSVDDRRASVDGSVRSFSPTTSSRDGSNRRNGNEENHNWSMW
Nucleotide sequence
Length: 1,263
>Phfumi.CG.MTP2014.S1088.g03234.02.t
GGAGGCGGAAACCTTGAGGAAATCGAGCGCCTTCTCTCGTGTCCGATCTGCTTGGAAGTT
TACACCAAACCTGTGGTAATTCTGCCATGCCAGCATAACCTCTGCCGAAAATGCGCCAAC
GACGTTTTTCAAAACAGGGGCACCCCCATGGGGTCTGGTGGTCGATTCAGGTGTCCGACT
TGTCGTTACGAGGTAGTGCTTGATCGTCATGGAGTTTACGGACTACAGAGAAACTTGCTT
GTGGAAAACATTATTGACATGTACCAATCCGAAAACCGAAAGCCCAACTTTAAAAAGGCT
GAGGTATTAATGTGTGAAGAGCATGAGGAGGAAAGAGTGAACATATATTGCCTTACCTGC
CAGAAGCCAACCTGTTCCTTGTGTAAAGTGTTTGGACAACATCAAGAATGTGACGTGTCG
CCTATGGACAGCGTTTACAAAGACCAGAAGAGAGAACTGTCTGATTCGATCGCTGTTCTT
GTGTCCGGAAACGACCGCATGCAAGCAGTTATCAGCCAGACTGAAGAACTCGGAAAAATG
ACCGAAGCAAATGGACGAAAAGCAAAGAGCGATTTGTGTGAGACGTTTGACAAGCTATAC
GCGGTGCTGGAGGACAGAAAAAACACCATGATGGCAAAAATAACCTCTGATGTGCAGGAA
CGCAATCAGGTTTTGCAAGAGATGCTAAAAACTTACGGAAAACAACTGGAGGGCGCCAGC
AAATTGATGGAAGCTTCTTTAGGATTACTGGAGGAGCGAAGCGTCCCGCAATTTCTAAGT
CTTGCGAGAGAAACTATAAACAAGATCAGTGAAGCGTCACGTGCCTCTGACGTACGCAAG
CCAATCTTTAACATTCAGAACATGGACGAGTTCAAGGTCAATTTTGATCAACAAGAAGCA
ACGCTTCGACAACTTGACTTTCCCGATTTTCAAGAAGAGTGCGCAGTCGAGTCACGTGAC
GATGATGACGCGCACTGCAGCAACTCGCGACCGCAAGTAAATGCAAATGAGACGGGGACG
GAAACCCTCGTGAGCGAATCAGACGACGACGATGAAGTGACGCATGAAGTTGTGGAAGTT
TCGGTGGATTCTGACGAAACACCTGGTACGTCTGTGACGTCACGAAGTGATTTGGGCAGT
GTTGATGATCGTCGAGCATCCGTTGACGGATCTGTTAGAAGTTTCTCACCTACCACGTCA
TCAAGAGACGGTAGCAATAGGAGAAATGGAAACGAAGAGAATCACAATTGGAGCATGTGG
TAA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[3-92] 2.1E-19 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[14-59] 5.1E-11 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[14-62] 12.401 |
| SMART |
Znf_RING (IPR001841) - T[14-61] 9.6E-9 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[30-39] . |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[100-142] 11.69 |
| SMART |
Znf_B-box (IPR000315) - T[100-142] 3.2E-4 |
| Pfam |
Znf_B-box (IPR000315) - T[102-135] 2.3E-6 |
| CDD |
Znf_B-box (IPR000315) - T[104-142] 1.27837E-5 |
| ProSiteProfiles |
COS_domain (IPR017903) - T[250-308] 13.648 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRI54_HUMAN | 52.396 % | 342 | 1.2E-115 |
| TRI63_HUMAN | 47.771 % | 325 | 4.93E-109 |
| TRI55_HUMAN | 54.341 % | 353 | 9.13E-118 |