- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1133.g03312.02.t
Possible name(s)
DKC1; TRUB1
Gene model
Location
S1133 [3,145 / 6,540]
Amino acid sequence
Length: 303
>Phfumi.CG.MTP2014.S1133.g03312.02.p
MFLFQAIETLTGALFQRPPLISAVKRQLRIRTIYESKLLEFDAERHLGVFWVKCEAGTYI
RTLCVHIGLLLGVGGQMQELRRVRSGIVSEEDNLVTMHDVLDAQYQYDHHKDETYLRRVI
SPLEKLLLNHKRIILKDSAVNAICYGAKILLPGVLRYEDGIELNQEIVVITTKGEAICLA
IALMTTAVISTCDHGIVAKIKRVIMERDTYPKKWGLGPKATLKKNMIKQGLLGKFGKPNE
KTPKAYIEGNPDFSLADVGNIVKTEDAQKDIDSSSPAPKKRKRDDSETVTPKIEVIDNET
PLP
Nucleotide sequence
Length: 1,119
>Phfumi.CG.MTP2014.S1133.g03312.02.t
ATGTTTCTATTTCAGGCTATTGAAACCCTTACCGGTGCCCTGTTTCAAAGGCCACCGTTG
ATATCAGCTGTAAAGAGACAGCTACGTATTCGAACAATTTATGAAAGCAAATTGCTCGAA
TTTGATGCCGAAAGGCATTTAGGTGTGTTTTGGGTGAAGTGTGAGGCTGGAACTTACATT
CGAACTTTATGTGTGCATATCGGGTTACTGCTTGGCGTGGGAGGTCAAATGCAGGAGCTG
AGAAGAGTTCGATCAGGAATTGTTTCAGAAGAGGACAACTTAGTGACAATGCATGATGTT
CTGGATGCACAATATCAGTACGACCATCACAAGGATGAGACGTACCTTCGACGAGTGATC
AGTCCGCTTGAAAAACTTCTCCTTAACCACAAGCGAATTATCCTAAAAGACAGTGCGGTA
AATGCGATTTGTTACGGTGCGAAAATTTTGCTTCCTGGTGTCTTAAGATATGAAGATGGA
ATCGAATTAAACCAAGAAATTGTTGTCATCACCACAAAGGGAGAAGCGATCTGTTTGGCA
ATTGCACTAATGACCACTGCCGTGATTTCAACATGTGATCATGGAATTGTTGCCAAAATC
AAACGAGTCATCATGGAAAGGGACACTTACCCCAAAAAGTGGGGTTTGGGACCCAAGGCA
ACATTAAAAAAGAACATGATAAAACAAGGACTGTTAGGAAAATTCGGAAAACCAAACGAA
AAAACGCCAAAAGCTTACATCGAAGGCAACCCTGACTTCAGCTTGGCAGATGTTGGAAAC
ATTGTTAAGACAGAGGATGCACAAAAAGACATTGACTCTTCAAGTCCTGCTCCGAAAAAG
AGAAAAAGAGATGACTCAGAAACAGTTACCCCTAAAATTGAAGTTATAGACAACGAAACT
CCCCTTCCTTAAGCAAAGAAGGAAAAGAAAAAGAAGAAAAAAGAGAAAAAGGACAAACAA
GCAGATGCAACGATGGATACAAGTGTGGCTGACACAACTGCTGTTACCGACCAAAGTGGT
TTGATGTCCCCTGACAAAAAGTCAAAAAAAGACAAAAAACAAAAGAAAGAAAAAAAGGAA
AAGAAGAAGAAAAAGAAATCCCAGTCTGATGAAGACTGA
| PANTHER |
tRNA_PsdUridine_synth_B_fam (IPR004802) - T[4-288] 8.7E-149 |
| SUPERFAMILY |
PsdUridine_synth_cat_dom_sf (IPR020103) - T[5-128] 6.04E-35 |
| TIGRFAM |
tRNA_PsdUridine_synth_B_fam (IPR004802) - T[5-215] 6.6E-104 |
| Pfam |
TruB_C (IPR032819) - T[61-127] 4.2E-21 |
| TIGRFAM |
Uncharacterised_CHP00451 (IPR004521) - T[120-200] 5.6E-8 |
| Gene3D |
PUA_sf (IPR036974) - T[127-242] 6.1E-55 |
| SUPERFAMILY |
PUA-like_sf (IPR015947) - T[130-211] 1.16E-20 |
| ProSiteProfiles |
PUA (IPR002478) - T[130-205] 17.618 |
| Pfam |
PUA (IPR002478) - T[131-204] 4.9E-18 |
| SMART |
PUA (IPR002478) - T[131-205] 1.5E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DKC1_HUMAN | 72.014 % | 418 | 2.01E-145 |