Aniseed - Transcript Card

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Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S11461.g08795.02.t

Possible name(s)

ATP6V1D

Gene model

Phfumi.CG.MTP2014.S11461.g08795

Location

S11461 [3,760 / 5,126]

Sequences

Amino acid sequence

Length: 210

>Phfumi.CG.MTP2014.S11461.g08795.02.p
MSSSERIDIFPSRMNLTIMKTRLKGAHKGHSLLKKKADALKIRFHAVLKKIIEAKQQMGD
IMKEAAFSLAETKFSGGDFSPVVLQNVSKAQLKVRSKQENVAGVKLPAFEYYEDGTDSYE
LTGLARVIIPKIERTIAYIITELDEGEREEFFRLKKIQQKKEVKRSVQEAVRKEWEKKQE
KQFGNERLNQVLSTHVPNLLDDKEDEDLLF

Nucleotide sequence

Length: 630

>Phfumi.CG.MTP2014.S11461.g08795.02.t
ATGTCTTCTAGTGAAAGAATTGATATTTTTCCTTCACGAATGAATCTGACTATCATGAAA
ACAAGACTGAAAGGTGCACATAAAGGTCACAGTTTACTCAAAAAGAAAGCTGATGCTTTG
AAGATTCGGTTCCATGCTGTTCTTAAGAAGATAATAGAAGCAAAACAGCAGATGGGTGAT
ATTATGAAAGAGGCAGCATTTTCACTTGCTGAAACAAAGTTTTCTGGTGGCGACTTCAGC
CCTGTTGTGCTGCAAAATGTCAGTAAGGCACAACTGAAAGTTCGGAGCAAGCAAGAAAAT
GTTGCTGGTGTAAAACTGCCAGCATTTGAATACTATGAGGATGGAACAGACAGTTATGAG
CTAACTGGATTAGCAAGAGTAATCATACCTAAAATTGAGCGGACAATTGCATACATCATC
ACTGAGTTGGATGAAGGAGAGAGAGAAGAGTTCTTTCGACTAAAGAAGATTCAACAGAAG
AAAGAGGTCAAGCGGAGCGTGCAGGAAGCTGTACGCAAAGAATGGGAGAAAAAGCAAGAG
AAACAGTTTGGTAACGAGAGATTAAATCAAGTCCTATCTACACATGTTCCAAATCTTCTT
GATGATAAGGAAGATGAAGATTTGTTGTTT

InterProScan

PANTHER	V_ATPase_D (IPR002699) - T[1-126] 2.5E-65 - T[126-210] 2.5E-65
TIGRFAM	V_ATPase_D (IPR002699) - T[8-121] 3.7E-26
Pfam	V_ATPase_D (IPR002699) - T[15-126] 2.2E-33 - T[125-159] 1.8E-11

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VATD_HUMAN	50.388 %	233	1.04E-77