Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'cign062b11'
  2. Transcript 'Boleac.CG.SB_v3.S7.g...'
  3. Clone 'cign070o18'
  4. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S11748.g08854.02.t

Possible name(s)

CDC6; ORC1

Location

S11748 [501 / 4,217]

Sequences

Amino acid sequence

Length: 635

>Phfumi.CG.MTP2014.S11748.g08854.02.p
MAFRTRSGKLYGTPDVSLAKKCLGVSKSALTKSASKRLNLLGQQLPELEGHSLIDDNVLD
EIFKLSPVSPVKRCKENIKPSVANCRILLSPLRSLSLNSPKSKKVDAAQSAFVRNRLNLA
LSGSTDPATGYCTQLPKSPTKLPLGDVSNTLKFASPQKANSQKVEKQISPKRSLDASIKS
QSPSPTKKQKINKLNVPEVESGKTDGVKKCSSPSKKESKSLKSTPVRKVLMETQNHNIPA
EEMKASSKSPVKRGHKDSSFSKIKHALHNAAPATLVGRESEIKEITNFISDHANSNTAGS
LYISGAPGTGKSACLMNILSQSKVKKMVGQIITVNCMSIRSAASIYQRIASQLGALSRQS
KTSRSALKYIENHLTSSGEMILLFLDEMDQLDSKQQEVLYTMFGWSSLQNSRMILIGIAN
SLDLTDRILPRLQASTACKPNLINFQPYSKDQLVKILQDRVEQAKNANKQSGPSLIDPMA
IQFCARKVAAMTGDARKALDVCRRAVEVVEMSRNKSQDNISSIPEKVGLLQISNIMQGVY
DSGNLCQQKTSCEQDNDDTFPLQQKLVVCTLFLLCKTSKCKEVPLGKLHESYTTICKKRQ
VPAVGQSEFVSLCELVESRGILSTRKAKQVRQSKV

Nucleotide sequence

Length: 1,905

>Phfumi.CG.MTP2014.S11748.g08854.02.t
ATGGCATTTCGAACCAGAAGCGGAAAACTGTACGGAACCCCAGATGTGTCTTTGGCAAAA
AAATGCCTAGGGGTTTCAAAATCTGCATTGACTAAGTCCGCAAGCAAGCGCCTAAACTTA
CTTGGCCAACAACTGCCCGAACTGGAGGGACATTCACTGATTGACGACAATGTACTTGAC
GAAATCTTTAAGCTTTCTCCAGTGTCACCTGTTAAGAGATGCAAGGAAAATATTAAACCG
AGTGTTGCGAACTGCAGAATTCTGCTTTCACCTTTGCGATCATTGTCCCTAAATTCACCT
AAAAGTAAAAAAGTCGATGCTGCTCAAAGTGCTTTTGTCAGAAATCGTTTGAACCTTGCA
TTGTCTGGATCTACTGACCCTGCAACAGGTTACTGCACGCAACTACCAAAGTCACCGACA
AAACTGCCACTTGGTGATGTATCCAACACTCTTAAGTTTGCTTCACCACAAAAGGCCAAT
TCTCAGAAAGTTGAGAAGCAAATTTCACCCAAAAGATCTCTTGATGCAAGTATTAAATCA
CAGTCACCATCACCAACCAAAAAACAGAAGATTAACAAGCTAAATGTCCCAGAAGTGGAA
TCAGGTAAAACAGATGGGGTCAAAAAATGTTCAAGTCCATCCAAAAAGGAATCAAAAAGT
CTGAAATCCACTCCTGTACGAAAAGTCCTCATGGAAACTCAAAATCATAATATTCCTGCT
GAAGAAATGAAAGCAAGTTCCAAATCACCAGTTAAGCGTGGACATAAAGATTCCTCGTTC
TCCAAGATAAAGCATGCATTGCATAATGCTGCCCCAGCCACTCTTGTTGGTCGGGAAAGT
GAAATAAAGGAAATTACAAACTTCATATCAGATCATGCTAACAGCAATACTGCTGGCAGC
TTGTACATATCTGGTGCCCCAGGAACTGGAAAAAGTGCCTGTTTAATGAACATTTTATCA
CAATCAAAGGTGAAAAAGATGGTGGGACAAATTATCACTGTTAATTGCATGTCCATTCGA
TCAGCCGCCTCCATTTATCAGCGTATCGCTTCACAACTTGGTGCTTTAAGTCGACAATCG
AAGACCTCCCGTTCAGCTTTGAAGTACATTGAAAATCATTTGACATCTTCTGGTGAAATG
ATACTTTTGTTTTTGGATGAGATGGATCAACTAGACAGCAAACAACAGGAAGTTTTATAC
ACCATGTTTGGCTGGTCGAGCTTGCAAAACTCTCGAATGATTTTAATCGGAATTGCCAAT
TCGCTTGACTTGACAGACAGAATACTACCAAGACTCCAAGCCAGCACGGCTTGCAAACCG
AATCTCATCAACTTTCAACCGTATTCAAAAGACCAACTTGTGAAAATTCTGCAAGACAGA
GTGGAACAGGCAAAAAATGCGAACAAACAATCTGGTCCAAGTCTTATCGATCCAATGGCG
ATTCAATTTTGTGCAAGGAAAGTTGCAGCCATGACCGGTGATGCGAGAAAAGCTTTAGAT
GTTTGCCGCAGGGCTGTAGAAGTTGTCGAGATGTCAAGAAACAAGTCGCAAGATAATATC
AGCTCAATCCCTGAAAAAGTTGGATTACTGCAAATCTCCAACATCATGCAAGGTGTCTAC
GATTCCGGCAATCTTTGTCAGCAGAAAACCTCCTGCGAGCAAGACAACGATGACACTTTT
CCGTTGCAACAGAAACTGGTTGTGTGTACGTTATTTCTGCTGTGCAAGACCTCAAAGTGC
AAAGAAGTTCCTTTGGGAAAGCTGCATGAATCTTACACCACTATATGCAAGAAACGTCAA
GTTCCTGCTGTCGGACAATCTGAGTTTGTATCCCTGTGTGAACTGGTCGAGTCGAGAGGA
ATTCTCAGCACTCGCAAGGCAAAGCAAGTCAGACAATCGAAGGTA

InterProScan

PIRSF
Cdc6/18 (IPR016314) - T[133-635] 1.3E-131
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[272-513] 9.3E-38
SMART
AAA+_ATPase (IPR003593) - T[297-435] 3.3E-4
Pfam
AAA+_ATPase (IPR003593) - T[297-418] 1.6E-13
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[558-627] 7.75E-15
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[560-635] 8.4E-12
CDD
Cdc6_C (IPR015163) - T[561-628] 7.12751E-15
SMART
Cdc6_C (IPR015163) - T[568-635] 6.0E-4
Pfam
Cdc6_C (IPR015163) - T[569-633] 1.4E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CDC6_HUMAN 44.419 % 352 7.4E-114
ORC1_HUMAN 30.769 % 150 5.11E-38