- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S11956.g08884.01.t
Possible name(s)
SF1
Gene model
Location
S11956 [3,371 / 5,378]
Amino acid sequence
Length: 446
>Phfumi.CG.MTP2014.S11956.g08884.01.p
QSNCKIMIRGKGSVKEGKIGRKDGQPLPGEDEPLHALVSSTSIENVQRAVLEIQSIIKQG
IEQPEEDNDLRKLQLMELAKLNGTLREDLMPKERAWLKPENQTITNTTVCTKCGGRGHLA
QDCRGQHPSENLQQGEGGAGGDGVDRAKMDSEYMSLMAELGEGPPPSSNQGKGGNQPGGR
GGFNNFQGNRFGGPRPWGGGSRPPRFGGPPGQRPRFGPRGNNMPPMMNQGGPPPPWMAPG
PYGPQGGPNQWGPPGGMPPYGGYGGPPGEGNSNDGNMPQWMPGQDGNMMGGGPMPMYGPP
GEQNSGSNYFTQPPPPPPSSAPQPPPPPSSGSSAMPWQSWGEQGESGENGKTSKASGNST
DSNAGSMMAGQQMGYGMGYGMWGMGMPPGGMAPGPVPPPMPSGPGPVPPPPPGGQDSSGS
GGMDYPGMGMMPSYGMPPAPPPPPPQ
Nucleotide sequence
Length: 1,341
>Phfumi.CG.MTP2014.S11956.g08884.01.t
CAGAGCAACTGCAAAATCATGATCCGTGGAAAAGGCTCTGTTAAAGAAGGAAAGATCGGG
CGCAAAGACGGGCAACCTCTTCCTGGGGAGGATGAACCTCTTCATGCTCTTGTCTCCTCA
ACATCCATTGAAAATGTCCAGAGAGCCGTTTTAGAGATTCAATCAATAATTAAGCAGGGA
ATTGAACAGCCAGAAGAAGACAATGATTTAAGGAAACTGCAACTGATGGAGCTGGCAAAA
CTCAATGGAACTTTGCGCGAAGATCTAATGCCCAAAGAACGAGCTTGGTTAAAGCCAGAG
AACCAGACAATTACCAATACTACAGTGTGTACAAAATGTGGAGGGCGTGGTCATCTTGCC
CAAGACTGTAGAGGTCAACATCCAAGTGAAAATCTCCAGCAAGGAGAAGGGGGTGCTGGC
GGTGATGGAGTGGACCGAGCCAAGATGGACAGTGAGTACATGTCATTGATGGCTGAACTT
GGTGAAGGGCCTCCGCCATCCAGCAACCAAGGCAAGGGAGGCAATCAACCAGGTGGCAGA
GGGGGCTTCAACAACTTTCAGGGAAATCGCTTTGGAGGCCCAAGACCATGGGGTGGTGGA
TCAAGACCGCCTAGATTTGGGGGACCTCCTGGACAACGGCCAAGGTTTGGACCAAGAGGA
AACAATATGCCTCCAATGATGAACCAGGGCGGTCCTCCACCACCATGGATGGCCCCTGGA
CCATATGGACCACAAGGAGGACCAAACCAGTGGGGTCCACCGGGTGGTATGCCTCCATAT
GGTGGTTATGGTGGGCCACCTGGAGAAGGTAACTCGAATGATGGCAACATGCCTCAATGG
ATGCCGGGTCAAGACGGAAACATGATGGGTGGAGGCCCCATGCCTATGTATGGACCACCA
GGCGAACAAAACTCCGGATCAAACTACTTCACTCAGCCCCCACCGCCACCCCCAAGCAGT
GCCCCACAGCCCCCTCCCCCTCCATCGTCTGGTTCATCTGCAATGCCATGGCAGAGTTGG
GGTGAGCAGGGTGAATCTGGTGAGAATGGAAAAACTTCGAAGGCTTCTGGTAACAGCACA
GATTCTAATGCTGGGTCAATGATGGCAGGACAACAGATGGGCTATGGAATGGGTTATGGA
ATGTGGGGTATGGGAATGCCCCCTGGTGGGATGGCCCCTGGACCTGTCCCACCTCCAATG
CCCTCAGGACCAGGTCCTGTACCACCACCGCCACCTGGTGGTCAAGACAGTAGTGGCTCA
GGTGGCATGGATTATCCTGGCATGGGCATGATGCCAAGTTATGGAATGCCCCCTGCCCCA
CCTCCGCCCCCTCCACAGTGA
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[1-84] 1.18E-9 |
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[1-89] 1.1E-26 |
| PANTHER |
BBP/SF1 (IPR031150) - T[2-327] 8.3E-66 |
| SUPERFAMILY |
Znf_CCHC_sf (IPR036875) - T[98-126] 6.98E-5 |
| SMART |
Znf_CCHC (IPR001878) - T[109-125] 0.0053 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[110-124] 9.554 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SF01_HUMAN | 62.5 % | 216 | 1.6E-63 |