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TRANSCRIPT CARD

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  1. Clone 'csef026g03' > 
  2. Clone 'cijv049n12' > 
  3. Clone 'AHC0AAA146YB14' > 
  4. Transcript 'Cisavi.CG.ENS81.R26....' > 
  5. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S11956.g08884.02.t

Possible name(s)

SF1

Gene model

Phfumi.CG.MTP2014.S11956.g08884

Location

S11956 [3,371 / 5,378]

Sequences

Amino acid sequence

Length: 446

>Phfumi.CG.MTP2014.S11956.g08884.02.p
QSNCKIMIRGKGSVKEGKIGRKDGQPLPGEDEPLHALVSSTSIENVQRAVLEIQSIIKQG
IEQPEEDNDLRKLQLMELAKLNGTLREDLMPKERAWLKPENQTITNTTVCTKCGGRGHLA
QDCRGQHPSENLQQGEGGAGGDGVDRAKMDSEYMSLMAELGEGPPPSSNQGKGGNQPGGR
GGFNNFQGNRFGGPRPWGGGSRPPRFGGPPGQRPRFGPRGNNMPPMMNQGGPPPPWMAPG
PYGPQGGPNQWGPPGGMPPYGGYGGPPGEGNSNDGNMPQWMPGQDGNMMGGGPMPMYGPP
GEQNSGSNYFTQPPPPPPSSAPQPPPPPSSGSSAMPWQSWGEQGESGENGKTSKASGNST
DSNAGSMMAGQQMGYGMGYGMWGMGMPPGGMAPGPVPPPMPSGPGPVPPPPPGGQDSSGS
GGMDYPGMGMMPSYGMPPAPPPPPPQ

Nucleotide sequence

Length: 1,341

>Phfumi.CG.MTP2014.S11956.g08884.02.t
CAGAGCAACTGCAAAATCATGATCCGTGGAAAAGGCTCTGTTAAAGAAGGAAAGATCGGG
CGCAAAGACGGGCAACCTCTTCCTGGGGAGGATGAACCTCTTCATGCTCTTGTCTCCTCA
ACATCCATTGAAAATGTCCAGAGAGCCGTTTTAGAGATTCAATCAATAATTAAGCAGGGA
ATTGAACAGCCAGAAGAAGACAATGATTTAAGGAAACTGCAACTGATGGAGCTGGCAAAA
CTCAATGGAACTTTGCGCGAAGATCTAATGCCCAAAGAACGAGCTTGGTTAAAGCCAGAG
AACCAGACAATTACCAATACTACAGTGTGTACAAAATGTGGAGGGCGTGGTCATCTTGCC
CAAGACTGTAGAGGTCAACATCCAAGTGAAAATCTCCAGCAAGGAGAAGGGGGTGCTGGC
GGTGATGGAGTGGACCGAGCCAAGATGGACAGTGAGTACATGTCATTGATGGCTGAACTT
GGTGAAGGGCCTCCGCCATCCAGCAACCAAGGCAAGGGAGGCAATCAACCAGGTGGCAGA
GGGGGCTTCAACAACTTTCAGGGAAATCGCTTTGGAGGCCCAAGACCATGGGGTGGTGGA
TCAAGACCGCCTAGATTTGGGGGACCTCCTGGACAACGGCCAAGGTTTGGACCAAGAGGA
AACAATATGCCTCCAATGATGAACCAGGGCGGTCCTCCACCACCATGGATGGCCCCTGGA
CCATATGGACCACAAGGAGGACCAAACCAGTGGGGTCCACCGGGTGGTATGCCTCCATAT
GGTGGTTATGGTGGGCCACCTGGAGAAGGTAACTCGAATGATGGCAACATGCCTCAATGG
ATGCCGGGTCAAGACGGAAACATGATGGGTGGAGGCCCCATGCCTATGTATGGACCACCA
GGCGAACAAAACTCCGGATCAAACTACTTCACTCAGCCCCCACCGCCACCCCCAAGCAGT
GCCCCACAGCCCCCTCCCCCTCCATCGTCTGGTTCATCTGCAATGCCATGGCAGAGTTGG
GGTGAGCAGGGTGAATCTGGTGAGAATGGAAAAACTTCGAAGGCTTCTGGTAACAGCACA
GATTCTAATGCTGGGTCAATGATGGCAGGACAACAGATGGGCTATGGAATGGGTTATGGA
ATGTGGGGTATGGGAATGCCCCCTGGTGGGATGGCCCCTGGACCTGTCCCACCTCCAATG
CCCTCAGGACCAGGTCCTGTACCACCACCGCCACCTGGTGGTCAAGACAGTAGTGGCTCA
GGTGGCATGGATTATCCTGGCATGGGCATGATGCCAAGTTATGGAATGCCCCCTGCCCCA
CCTCCGCCCCCTCCACAGTGA

InterProScan

SUPERFAMILY
KH_dom_type_1_sf (IPR036612) - T[1-84] 1.18E-9
Gene3D
KH_dom_type_1_sf (IPR036612) - T[1-89] 1.1E-26
PANTHER
BBP/SF1 (IPR031150) - T[2-327] 8.3E-66
SUPERFAMILY
Znf_CCHC_sf (IPR036875) - T[98-126] 6.98E-5
SMART
Znf_CCHC (IPR001878) - T[109-125] 0.0053
ProSiteProfiles
Znf_CCHC (IPR001878) - T[110-124] 9.554

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SF01_HUMAN 62.5 % 216 1.6E-63