- Transcript 'Cisavi.CG.ENS81.R60....' >
- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.S612.3.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S11.g00238.01.t
Possible name(s)
LRP4; LRP6
Gene model
Location
S11 [143,346 / 153,551]
Amino acid sequence
Length: 1,038
>Phfumi.CG.MTP2014.S11.g00238.01.p
MTFRILVGSLVLSLCFIHEIESQQELNNQEEECIDGPSMWYTGRRNFTASGIACQRWDSN
FPHVPKQTPSDGSNHNYCRNPDGDLKGTWCYTMDPTKRWEYCKINKCPDDSVVIWTNHDS
KNGGAHILSVKADPEIVKLQTDTVGIFNVSVLVASNQSKTEFWALTADYNRQMIFFTDYM
SEYIGVRYMDLGITAQFLEGMAHGIENMAYDWLTGNLYWTDSEFKWIMTVDRTFSFYTPV
YRTNMDPPYAIALHAKQRRLFFSIYQSAGSMIITTDLAGKGEKILFQNPEVYDVTGLTID
YTDDRLYWTDFTGYGGKIVSSKLDGSNKTLHHGRGGAIYWGISAYLDYLYVTDVHARYSP
AGEKHYSVWVINKLPSVDSVFRYTLEGKPRGISILSKNEDRSFDVVPSRGECLNQPACDH
ICLPRINATRECACLLGYTKVGDTRCVTNVVQDNFLLVADAGQGKVFQIPFNITSPNQYS
VIPLRKTKKVATIAIDAHTRNIYWSDKRVQTIKKAGLDGSRAYPLLKQHALSMAVDHRDG
NVYFVDEDSQTISVTTSSGSHTRVIMKPDNITNTDIKMLTLDTKNNFLYWTDGGTGVGNG
SVWRMKLDGNGKVLVYDKLNSPQAITIDYKRNSLFFGEAKTGMVYEKSLDELQVIQNTSH
LNAKQFDLSGHIIRLTFFIADIKVHENTLFFVDGKTNKIEKFDLTSGPASIKTYGPTEFY
RVTSLAVYSTSYYNSYLRPIANPCANQNHPCQHICVPLSNTRSRCLCEAGSVQFGSACYR
TANTGQPPSYEEGSCSIDKTYSLLPCYNAAEVTWKDPVWTDDKTPRSGLTLTRPPWNSPA
NFTAGTYIFSYTATDLDKNVARCTFNVYVKATSCGDPPMMPATLMIAGHMPCNNNFGAEY
VVRCVDPNMEIAFQGSNGDNITNICTKNGNWSIPSFESATCRPKPTTSPGKFLRAGPTTT
RNTKKQEPHTKKIHTISPTPSDSNTKGTVSGIVASQSAGLKPGTIAAIAVMAILLVIIVA
VVVIMTMRRRGSPWLQKI
Nucleotide sequence
Length: 3,114
>Phfumi.CG.MTP2014.S11.g00238.01.t
ATGACATTTCGAATTCTTGTTGGTAGTTTAGTTTTAAGTTTGTGTTTTATCCACGAAATT
GAATCGCAACAGGAATTGAACAACCAAGAAGAAGAATGCATCGATGGACCCAGCATGTGG
TACACAGGAAGAAGGAACTTTACAGCATCAGGCATCGCTTGTCAGAGGTGGGACAGCAAC
TTCCCCCACGTTCCCAAGCAAACTCCCAGTGATGGAAGCAACCACAATTACTGCAGGAAT
CCCGATGGAGATCTGAAAGGAACTTGGTGTTACACAATGGATCCAACGAAGCGGTGGGAG
TATTGCAAAATCAACAAATGCCCTGACGATTCGGTTGTGATTTGGACCAATCACGATTCA
AAGAACGGCGGCGCCCATATTTTGTCGGTAAAAGCTGACCCGGAGATTGTGAAGTTGCAA
ACTGACACAGTCGGAATCTTCAACGTTTCCGTCCTCGTCGCTTCTAACCAGTCCAAGACA
GAGTTCTGGGCTCTCACTGCCGACTACAACCGACAGATGATCTTCTTCACCGATTACATG
TCGGAATACATCGGAGTGCGATACATGGATCTCGGCATCACTGCTCAGTTCCTGGAGGGG
ATGGCGCACGGCATAGAAAACATGGCGTATGACTGGCTCACCGGGAATCTTTACTGGACC
GACTCTGAGTTCAAGTGGATTATGACTGTCGACCGAACCTTCAGTTTCTATACTCCGGTT
TACCGCACAAACATGGACCCCCCATACGCCATCGCCCTCCACGCCAAGCAAAGGCGACTC
TTCTTTTCCATCTACCAGTCGGCGGGATCCATGATCATCACCACAGATCTGGCGGGAAAA
GGAGAAAAGATCTTGTTCCAGAACCCAGAGGTTTATGACGTCACAGGTCTTACGATCGAT
TACACTGACGACAGATTGTACTGGACGGATTTTACCGGTTACGGAGGCAAAATCGTAAGC
AGCAAATTGGACGGAAGCAACAAAACTCTTCACCACGGAAGGGGTGGCGCCATCTACTGG
GGAATCAGCGCGTATTTGGATTACTTGTATGTAACAGACGTTCATGCCCGGTACAGTCCA
GCGGGGGAGAAGCATTACTCTGTGTGGGTGATCAACAAACTCCCCTCGGTCGACAGCGTG
TTCCGATACACCTTGGAGGGGAAACCACGTGGCATCTCGATACTCAGTAAAAATGAGGAC
CGCTCATTCGATGTCGTTCCATCCAGGGGCGAGTGTTTGAACCAGCCAGCCTGCGACCAC
ATCTGCCTCCCCCGCATCAACGCCACACGTGAATGTGCTTGTTTGCTCGGCTACACCAAA
GTCGGAGACACGAGATGCGTCACAAATGTTGTACAAGACAACTTCCTTCTAGTGGCAGAT
GCTGGACAGGGAAAAGTTTTCCAAATTCCTTTCAACATCACCAGCCCCAACCAGTACAGC
GTCATACCGCTACGAAAGACGAAGAAAGTTGCGACAATAGCGATAGACGCGCACACGAGA
AACATCTACTGGTCTGATAAACGAGTTCAAACTATAAAGAAAGCCGGTCTGGACGGGAGT
AGAGCATATCCACTGCTCAAACAACACGCGTTGAGCATGGCAGTTGACCACAGGGACGGC
AACGTTTATTTCGTCGACGAAGACAGTCAGACAATATCGGTGACAACGAGTAGCGGATCT
CACACACGTGTCATCATGAAACCTGACAATATCACCAACACCGACATCAAGATGCTAACA
CTTGACACCAAGAACAATTTCCTGTATTGGACCGACGGTGGAACAGGGGTTGGAAATGGG
AGTGTGTGGAGAATGAAACTGGACGGGAATGGAAAAGTTCTGGTTTACGACAAACTCAAT
TCCCCACAAGCAATCACGATCGACTATAAGCGCAACAGTTTGTTCTTCGGTGAGGCGAAG
ACGGGAATGGTTTACGAGAAATCGTTGGACGAGCTCCAAGTGATCCAGAATACTTCACAT
CTCAACGCGAAACAGTTCGACCTCTCCGGCCACATCATCAGGCTCACTTTCTTCATCGCA
GACATCAAAGTGCACGAAAATACTTTGTTCTTCGTCGACGGGAAAACGAATAAAATCGAA
AAATTCGATCTCACATCCGGACCAGCGTCGATCAAAACATACGGACCAACAGAGTTTTAC
CGCGTCACTTCTCTCGCTGTGTACAGCACCTCATACTACAACTCATACCTACGACCGATT
GCAAACCCATGTGCGAACCAGAATCATCCATGCCAGCATATCTGTGTACCGCTTTCCAAC
ACAAGAAGCAGATGTCTGTGTGAAGCGGGGAGCGTGCAGTTCGGAAGCGCGTGTTACAGG
ACTGCTAACACCGGTCAACCACCGAGTTACGAGGAAGGAAGCTGTTCCATCGATAAAACC
TATTCCCTCCTGCCTTGTTACAACGCAGCCGAAGTTACCTGGAAGGACCCGGTGTGGACA
GACGACAAAACACCCCGATCTGGTTTGACCTTGACCCGACCTCCATGGAATTCTCCCGCC
AATTTCACAGCCGGAACATACATCTTCTCCTACACCGCCACGGATTTAGACAAAAATGTC
GCAAGGTGTACTTTTAACGTCTACGTCAAAGCGACATCGTGCGGTGACCCCCCTATGATG
CCGGCGACATTGATGATAGCAGGTCACATGCCGTGCAACAACAACTTCGGGGCTGAATAC
GTAGTTCGATGCGTGGACCCCAACATGGAAATCGCCTTCCAAGGTTCGAATGGCGACAAC
ATCACAAATATTTGCACCAAGAATGGAAACTGGTCCATCCCGAGCTTCGAATCCGCTACC
TGTCGCCCTAAGCCCACCACGTCACCGGGTAAATTTTTACGCGCAGGTCCCACTACAACA
AGGAACACAAAAAAACAGGAACCACACACGAAAAAAATTCACACAATTTCACCTACACCT
AGCGATTCAAACACAAAAGGAACGGTGAGTGGCATTGTTGCGTCACAAAGTGCTGGACTT
AAGCCTGGAACGATTGCAGCAATTGCTGTCATGGCAATACTGCTCGTCATCATCGTCGCT
GTTGTCGTCATCATGACAATGCGCCGACGCGGGTCGCCATGGTTACAGAAGATC
| Gene3D |
Kringle_sf (IPR038178) - T[12-115] 4.0E-30 |
| SUPERFAMILY |
Kringle-like (IPR013806) - T[29-113] 4.11E-29 |
| CDD |
Kringle (IPR000001) - T[30-108] 1.81421E-32 |
| SMART |
Kringle (IPR000001) - T[31-109] 7.0E-28 |
| ProSiteProfiles |
Kringle (IPR000001) - T[32-107] 21.974 |
| Pfam |
Kringle (IPR000001) - T[33-107] 3.9E-19 |
| ProSitePatterns |
Kringle_CS (IPR018056) - T[77-90] . |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[116-444] 3.7E-46 - T[445-781] 7.3E-52 |
| SMART |
LDLR_classB_rpt (IPR000033) - T[150-194] 57.0 - T[195-237] 2.0 - T[238-282] 24.0 - T[283-328] 5.9E-6 - T[480-522] 4.5E-4 - T[523-562] 2.0 - T[569-612] 0.75 |
| ProSiteProfiles |
LDLR_classB_rpt (IPR000033) - T[172-214] 5.399 - T[215-257] 8.903 - T[258-303] 6.188 - T[304-328] 7.928 - T[500-528] 8.694 - T[540-585] 6.791 - T[586-631] 11.618 - T[687-731] 5.422 |
| SMART |
EGF-like_dom (IPR000742) - T[411-447] 0.027 - T[743-779] 9.9 |
| Pfam |
LDLR_classB_rpt (IPR000033) - T[586-629] 2.8E-4 |
| ProSiteProfiles |
HYR_dom (IPR003410) - T[783-871] 13.687 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRP4_HUMAN | 22.927 % | 150 | 9.74E-37 |
| LRP6_HUMAN | 23.144 % | 150 | 9.21E-37 |
| LRP5_HUMAN | 23.252 % | 140 | 8.95E-34 |