- Transcript 'KH2012:KH.L22.19.v1....' >
- Transcript 'Moocul.CG.ELv1_2.S55...' >
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- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S11.g00239.01.t
Possible name(s)
LRP1; LRP6
Gene model
Location
S11 [159,243 / 169,181]
Amino acid sequence
Length: 971
>Phfumi.CG.MTP2014.S11.g00239.01.p
FVFQMRRCLGFLLVLAFCHQVVAQSADCLSGPSVWYRGNQSTTNLGYTCQQWNATKPHIP
KYTPADGGQHNFCRNPDHDILGTWCYTTNSSKKWDYCNITKCPDDSLVIWTNVNQVNKTT
QLYSLPADPEIVRRQSPTSKINVTVFVGSNPGTQAEFWAVASDYSSKKIFFADYRTRYLG
IYDQTTNTTSLYLEGMGHGIESIAYDWRNENLYLTDSSLKWVLVADNQFQYYASIYKSDP
DPAYGLALHAMRRFLFFSTYKSRGSKIIRTDLAGKNATTLFAYPDVHDVTGMTVDYADEK
LYWTDFTGYGSLVMSCNFDGSNKTQKYYSGSSIFWGIASFNSILYVTDVHRRIDHTGSLY
YHLWWIPKGRNQKGRLNVGNYKLVGKPRGVTVMAQQTEQSPLDQVLAVGSCQASPACSQI
CLPRINATRECVCSIGYTKQGDTGCVTKSVGNKYMLISDAGQGKIFRVSLDNSSSNYSVF
QMALASKVTFMTNDGGAGNFIFWSDEKQLKIFKSTINGATARTLVDKVHARFLSFEPLDG
NLFYIDDDTQYIAFADAINGYVTTIMKPDRAERNRTSIRQLTLDLQMKKVYWTNTRSAND
QGQIWRMNYDGSNKELVFNYLNWPHGITIDQKNRTLYFTESKRSEIYAVPLASLTNVTGA
IPASRTKYSLASTKRKNGIITEIQVINNLIYFNDRSNNYMEVIDPNADNPGASPFGPRDF
YRIRSMVYYDTSYFLQYINKLGRPCALKGCSKNCVALSRGTSKCLCQDGFSFLTPNICTN
DGTHRPDNPPSYGLTCPSSKDRTLPPCSNSTTFSWATPAWTDDITATSNLTLTSPSTTSP
ATLGPGYYEFSYTATDESGNVGHCTFYFTITQTQCRARQGLGTDILESSTICGDDGPEYN
ISCVSPNQMLRYGGQTRAYMTNRCFSSGEWMYPDLNGLQCVTVTSTTTTTTARTTTIATT
TTMPTTTRTTT
Nucleotide sequence
Length: 2,913
>Phfumi.CG.MTP2014.S11.g00239.01.t
TTTGTGTTTCAGATGCGTCGGTGTTTAGGATTTTTGTTAGTTTTGGCATTTTGCCATCAA
GTCGTCGCTCAATCAGCAGATTGCCTTAGCGGTCCATCCGTGTGGTATCGCGGAAACCAA
AGCACAACGAATCTTGGTTATACTTGTCAACAATGGAATGCCACTAAACCACATATTCCC
AAATACACACCGGCAGATGGGGGGCAGCACAACTTCTGCAGAAATCCTGATCACGACATT
CTGGGAACTTGGTGTTACACAACAAACTCAAGCAAAAAGTGGGATTACTGCAACATCACA
AAATGCCCCGACGATTCGTTGGTGATTTGGACGAACGTGAACCAAGTCAACAAGACAACT
CAGCTTTACTCCCTACCCGCTGACCCCGAGATTGTGAGGAGACAATCACCGACCTCGAAA
ATCAATGTTACAGTGTTCGTGGGTTCGAATCCCGGCACGCAGGCCGAGTTCTGGGCAGTC
GCTTCCGATTATTCGTCCAAGAAAATATTCTTCGCCGATTACAGGACACGCTACCTTGGA
ATCTACGACCAAACCACCAACACAACGTCGCTGTACTTGGAAGGGATGGGACATGGAATT
GAGAGCATAGCTTACGACTGGAGGAATGAGAACCTCTATCTCACCGATTCATCGCTGAAA
TGGGTTCTGGTTGCTGACAATCAGTTCCAGTATTACGCCTCAATCTACAAGTCCGACCCT
GACCCAGCTTACGGCCTTGCTCTTCACGCCATGCGAAGATTTTTGTTTTTCTCTACTTAC
AAGTCACGTGGTTCGAAAATCATCCGAACAGATTTGGCGGGAAAAAACGCGACCACGTTG
TTCGCATATCCCGACGTGCATGACGTCACCGGTATGACGGTAGATTATGCAGATGAGAAA
TTGTACTGGACGGATTTTACCGGTTACGGCAGTTTGGTGATGAGTTGCAACTTTGACGGA
AGCAACAAAACGCAGAAGTACTACAGCGGATCTTCCATCTTCTGGGGAATCGCTTCATTT
AACAGCATTCTATACGTCACCGACGTCCACCGTCGCATCGACCACACGGGGTCGCTGTAC
TACCATCTGTGGTGGATCCCCAAAGGCAGGAATCAGAAGGGGCGATTGAATGTGGGTAAC
TACAAACTGGTGGGAAAACCCCGCGGGGTCACTGTGATGGCACAACAGACCGAACAATCT
CCATTGGATCAAGTTCTCGCCGTCGGATCGTGCCAAGCCTCCCCTGCCTGTTCCCAGATC
TGTCTCCCCCGGATCAACGCAACCAGAGAATGCGTGTGCTCCATCGGATACACCAAGCAG
GGGGATACCGGTTGCGTCACAAAGTCTGTCGGCAACAAGTACATGTTGATCAGCGATGCG
GGACAGGGAAAAATATTCAGAGTATCACTCGACAACTCGTCATCGAACTACTCTGTCTTC
CAAATGGCCCTAGCTTCGAAGGTGACCTTTATGACGAACGATGGTGGAGCAGGAAATTTC
ATCTTCTGGTCGGATGAAAAACAACTGAAGATATTTAAATCCACAATTAACGGAGCCACT
GCAAGAACGCTCGTCGACAAAGTGCACGCTCGATTTTTGTCGTTCGAGCCTTTGGACGGA
AATCTTTTCTACATTGATGACGACACGCAGTACATCGCGTTCGCTGACGCAATCAACGGT
TACGTCACAACGATAATGAAGCCGGATCGCGCGGAGAGGAACAGAACAAGCATTCGACAA
CTGACGCTCGACTTGCAAATGAAGAAAGTTTATTGGACCAATACACGAAGTGCGAATGAC
CAGGGACAGATTTGGAGGATGAATTATGACGGATCTAACAAGGAACTTGTCTTCAACTAC
CTCAACTGGCCACACGGAATCACTATTGACCAGAAAAACCGAACTCTCTATTTCACCGAA
TCCAAACGATCGGAAATTTACGCTGTACCTCTCGCGTCACTGACAAACGTCACAGGGGCA
ATCCCCGCAAGTAGAACCAAGTACAGCCTGGCGTCGACAAAACGGAAGAACGGGATTATA
ACAGAAATACAAGTGATCAACAACCTGATCTACTTCAACGACAGAAGCAACAATTACATG
GAAGTGATCGATCCCAACGCCGACAACCCAGGGGCTTCCCCGTTTGGACCCAGGGACTTT
TACCGGATTCGGAGCATGGTTTATTACGATACAAGTTACTTCCTGCAGTACATAAATAAA
CTTGGACGACCATGCGCTTTAAAGGGATGCAGCAAGAACTGCGTGGCTTTGTCGCGAGGA
ACTTCCAAATGTTTATGTCAGGATGGATTCAGCTTCCTAACCCCAAACATCTGCACAAAC
GATGGAACGCACAGACCGGACAACCCTCCATCATACGGGCTGACATGCCCCTCCAGTAAA
GACCGCACTCTCCCCCCTTGCTCGAACTCGACAACATTCTCATGGGCAACGCCCGCATGG
ACCGACGACATTACAGCAACAAGCAACTTGACGCTTACGTCACCATCAACCACGTCACCA
GCCACATTGGGCCCTGGCTATTATGAGTTCAGTTATACGGCAACAGATGAATCAGGAAAT
GTTGGCCATTGCACATTCTATTTCACCATCACACAAACCCAGTGTCGTGCCCGGCAGGGA
TTGGGAACAGATATATTAGAATCATCAACAATTTGTGGTGACGACGGTCCAGAGTACAAC
ATTTCCTGCGTTTCACCCAACCAAATGTTGCGATATGGAGGTCAAACGAGAGCGTACATG
ACCAACCGCTGTTTTAGCTCTGGTGAATGGATGTATCCTGATCTTAATGGACTTCAGTGT
GTCACAGTCACCAGTACAACAACAACTACAACTGCTAGAACAACTACAATTGCTACAACA
ACAACAATGCCAACTACAACCAGGACAACAACA
| Gene3D |
Kringle_sf (IPR038178) - T[14-110] 1.7E-25 |
| SUPERFAMILY |
Kringle-like (IPR013806) - T[17-108] 4.59E-27 |
| CDD |
Kringle (IPR000001) - T[25-103] 1.54869E-25 |
| SMART |
Kringle (IPR000001) - T[26-104] 1.4E-21 |
| ProSiteProfiles |
Kringle (IPR000001) - T[27-102] 21.231 |
| Pfam |
Kringle (IPR000001) - T[28-102] 1.1E-16 |
| ProSitePatterns |
Kringle_CS (IPR018056) - T[72-85] . |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[111-445] 2.8E-40 - T[446-784] 4.0E-37 |
| ProSiteProfiles |
LDLR_classB_rpt (IPR000033) - T[167-209] 5.051 - T[210-252] 4.981 - T[253-298] 6.397 - T[299-323] 6.838 - T[499-525] 7.812 - T[588-633] 11.177 |
| SMART |
LDLR_classB_rpt (IPR000033) - T[189-230] 35.0 - T[233-277] 8.6 - T[278-323] 5.0E-6 - T[522-562] 72.0 - T[563-614] 0.048 - T[616-656] 34.0 |
| SMART |
EGF-like_dom (IPR000742) - T[410-446] 13.0 - T[744-779] 3.1 |
| ProSiteProfiles |
HYR_dom (IPR003410) - T[786-872] 16.582 |
| Pfam |
HYR_dom (IPR003410) - T[789-870] 1.2E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRP1_HUMAN | 22.013 % | 103 | 3.22E-22 |
| LRP4_HUMAN | 21.756 % | 96.7 | 4.15E-20 |
| LRP5_HUMAN | 23.632 % | 97.1 | 3.08E-20 |