Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S120.g01057.01.t

Possible name(s)

GNL1; GNL2; LSG1

Gene model

Phfumi.CG.MTP2014.S120.g01057

Location

S120 [52,108 / 53,167]

Sequences

Amino acid sequence

Length: 352

>Phfumi.CG.MTP2014.S120.g01057.01.p
TDLETYVKEVDPKKQNLILVNKADLLSSQQREVWQNYFHQLNVTAVFWSAVLENEKLEDG
EESPQVDNENLLSREQLIKFFKDLVAKEKKVIGMVGYPNVGKSSTVNTLMGVKRVAVSAT
PGRTKHFQTLHVDDELCLCDCPGLVFPSFLSSKAEMVLSGILPIDQMRDHISPMNLLSHR
IPRKVIEVTYGTNIPRPPEGDNPNRPPTSSEILNAHALLRGFMTSHGQPDNARSARIILK
DYVNGKLLCSKAPPSVDEDLYRDWTVSKVDIVLNKLAAEVSVSTDMKPVVERIHRLNKQV
HEQASEIEAEFFNPEQVKTFSKGRKSPGGETKNKKHFNKKKEKMRRVRTVQY

Nucleotide sequence

Length: 1,059

>Phfumi.CG.MTP2014.S120.g01057.01.t
ACAGATTTGGAAACTTATGTGAAGGAAGTCGACCCAAAAAAACAAAACCTGATTCTGGTC
AACAAAGCAGATTTACTTTCCTCTCAACAGAGAGAAGTTTGGCAGAATTATTTCCACCAA
TTGAATGTCACCGCTGTGTTTTGGTCTGCTGTTTTGGAGAATGAAAAGCTGGAGGACGGT
GAAGAGTCACCACAAGTGGACAATGAGAATTTGTTGTCAAGGGAACAACTGATCAAATTT
TTCAAAGATTTAGTTGCAAAAGAAAAGAAAGTTATCGGAATGGTTGGTTATCCCAATGTA
GGGAAAAGTTCTACAGTGAACACTTTGATGGGGGTGAAGCGAGTGGCAGTGTCGGCTACA
CCGGGTAGAACCAAGCACTTTCAGACACTACATGTGGATGATGAGTTGTGTTTATGCGAC
TGTCCTGGCCTTGTCTTCCCCAGTTTCCTGTCAAGTAAAGCTGAGATGGTGCTCAGCGGA
ATTTTGCCGATCGACCAGATGCGAGACCACATTTCCCCAATGAACCTGCTCAGTCATAGA
ATTCCTCGCAAGGTGATCGAGGTGACCTACGGCACAAACATACCACGACCACCGGAGGGC
GATAATCCAAATCGCCCTCCCACATCTTCAGAGATTTTAAATGCTCATGCACTGCTGCGA
GGATTTATGACATCACACGGACAACCTGACAATGCTCGATCAGCTCGAATTATTCTTAAG
GATTACGTGAATGGAAAGCTACTCTGCAGCAAAGCACCACCTAGTGTTGATGAGGATTTG
TACAGAGATTGGACAGTTTCCAAAGTTGACATCGTTCTCAACAAACTGGCAGCGGAAGTT
TCGGTGTCGACTGACATGAAACCTGTAGTTGAGAGAATCCATCGACTCAACAAACAGGTT
CATGAGCAAGCAAGCGAAATCGAAGCAGAGTTTTTCAATCCTGAACAGGTTAAGACATTT
TCCAAGGGCCGAAAAAGTCCGGGAGGGGAAACTAAGAACAAAAAACATTTCAACAAGAAA
AAGGAGAAGATGCGAAGAGTTCGGACTGTTCAATATTGA

InterProScan

SUPERFAMILY	P-loop_NTPase (IPR027417) - T[13-180] 7.65E-27
Pfam	GTP_binding_domain (IPR006073) - T[92-148] 4.0E-13
PRINTS	GTP_binding_domain (IPR006073) - T[92-112] 1.5E-5 - T[138-153] 1.5E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NOG2_HUMAN	26.172 %	91.7	3.1E-20
LSG1_HUMAN	47.855 %	265	2.19E-83
GNL1_HUMAN	39.227 %	115	1.57E-28