- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S12350.g08946.01.t
Possible name(s)
LRIG2; LRIG3; TRIL
Gene model
Location
S12350 [2,251 / 5,133]
Amino acid sequence
Length: 402
>Phfumi.CG.MTP2014.S12350.g08946.01.p
MSKLATILVLAVCATLAIAQENPEMCSRVPYHLGDETTVTVTCHLNGPITIDEDFSYATL
HGIQNLAKQKKSLLSLLETTVQVLVYRLIMDDSGVSDIEDGGFGYEPTLKELNLRQNSLK
SIGRYTFVGISNLEILDLGANSITTVQPRSFVPLRNVKTLEMDNNKLTWINYFTFQGLSQ
VNFINLDNNNISRWSSAAFAPLWQLEYLHLAYNRISSLDGSKLAGMNALKYLSLKGNVID
SIAAGAFNGKPKLETLDLSGNKLSKITAQTFSGLVSLKTLNLRNNVIRTIDDLSFAHMPQ
MRELDLSHNGLATLSRGMFIGMENINSFNVADNWMQATALSPDPEFIEPRNKLIEAIGII
CRKPGVYYADLSGNLLKPMLQNVTEAELGFDFSDRSQHVCVF
Nucleotide sequence
Length: 1,209
>Phfumi.CG.MTP2014.S12350.g08946.01.t
ATGTCAAAACTTGCAACAATCCTAGTCTTGGCAGTCTGCGCCACGTTAGCAATCGCCCAG
GAAAATCCAGAGATGTGCAGCAGGGTCCCATACCACCTCGGCGACGAAACCACTGTGACG
GTCACGTGTCACCTGAACGGACCAATCACGATCGACGAAGACTTTTCGTACGCGACTCTG
CATGGCATACAAAACCTCGCCAAGCAAAAGAAGAGTCTGCTGTCTCTATTGGAGACGACG
GTACAAGTCCTCGTATATCGCCTTATCATGGACGATTCGGGAGTCAGCGATATCGAAGAT
GGAGGTTTTGGATACGAGCCCACACTCAAGGAGCTCAATCTTCGCCAAAACAGCCTCAAA
AGCATTGGACGCTACACCTTTGTTGGTATTTCAAACCTGGAGATTCTGGATCTGGGCGCT
AACTCTATTACTACTGTTCAACCACGCTCCTTCGTGCCTCTACGCAACGTCAAGACTTTG
GAAATGGACAACAACAAACTTACATGGATCAATTACTTTACGTTTCAAGGCCTTAGCCAG
GTCAACTTCATCAATCTCGATAACAACAACATCAGCCGATGGTCCAGCGCCGCGTTCGCT
CCTCTATGGCAACTCGAGTATCTTCATCTCGCCTACAACCGTATTTCGTCGCTTGATGGC
AGCAAACTCGCAGGAATGAACGCTCTGAAATATTTGTCTCTGAAGGGCAACGTTATTGAC
AGCATCGCGGCTGGTGCATTCAATGGCAAACCGAAACTGGAGACTTTGGACTTATCTGGC
AACAAATTAAGTAAGATAACTGCGCAAACATTCAGTGGATTGGTGTCACTAAAGACACTC
AACCTGCGCAACAACGTCATCAGGACGATCGACGACCTCTCTTTCGCACATATGCCTCAG
ATGCGCGAGTTGGATCTGTCGCACAATGGCCTTGCAACATTGAGCCGAGGCATGTTTATC
GGAATGGAGAACATCAACAGCTTCAACGTTGCAGACAACTGGATGCAGGCAACTGCTCTC
TCGCCTGATCCGGAGTTCATCGAACCAAGAAACAAATTGATTGAAGCTATCGGAATCATA
TGCCGTAAGCCTGGAGTTTATTACGCTGATCTTTCTGGAAACTTACTTAAGCCTATGCTT
CAGAACGTGACAGAAGCAGAACTTGGGTTTGACTTTTCTGATCGCAGTCAGCATGTCTGT
GTTTTCTGA
| Gene3D |
LRR_dom_sf (IPR032675) - T[64-225] 3.8E-32 - T[226-269] 1.3E-10 - T[270-379] 2.7E-16 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[107-129] 48.0 - T[130-153] 4.4 - T[154-177] 14.0 - T[178-201] 14.0 - T[202-225] 50.0 - T[226-249] 5.5 - T[251-273] 0.48 - T[274-297] 0.04 - T[298-321] 0.0098 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[107-167] 7.9E-16 - T[251-311] 5.8E-18 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[108-129] 6.973 - T[132-153] 6.88 - T[156-177] 5.24 - T[180-201] 5.363 - T[204-225] 7.381 - T[228-249] 5.995 - T[252-273] 8.112 - T[276-297] 8.536 - T[300-321] 5.81 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRIG2_HUMAN | 31.944 % | 109 | 1.09E-25 |
| TRIL_HUMAN | 27.798 % | 108 | 1.39E-25 |
| LRIG3_HUMAN | 32.599 % | 110 | 6.56E-26 |