- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S12350.g08946.02.t
Possible name(s)
LRIG2; LRIG3; TRIL
Gene model
Location
S12350 [2,449 / 5,106]
Amino acid sequence
Length: 371
>Phfumi.CG.MTP2014.S12350.g08946.02.p
EMCSRVPYHLGDETTVTVTCHLNGPITIDEDFSYATLHGIQNLAKQKKSLLSLLETTVQV
LVYRLIMDDSGVSDIEDGGFGYEPTLKELNLRQNSLKSIGRYTFVGISNLEILDLGANSI
TTVQPRSFVPLRNVKTLEMDNNKLTWINYFTFQGLSQVNFINLDNNNISRWSSAAFAPLW
QLEYLHLAYNRISSLDGSKLAGMNALKYLSLKGNVIDSIAAGAFNGKPKLETLDLSGNKL
SKITAQTFSGLVSLKTLNLRNNVIRTIDDLSFAHMPQMRELDLSHNGLATLSRGMFIGME
NINSFNVADNWMQATALSPDPEFIEPRNKLIEAIGIICRKPGVYYADLSGNLLKPMLQNV
TEAELGFDFSD
Nucleotide sequence
Length: 1,113
>Phfumi.CG.MTP2014.S12350.g08946.02.t
GAGATGTGCAGCAGGGTCCCATACCACCTCGGCGACGAAACCACTGTGACGGTCACGTGT
CACCTGAACGGACCAATCACGATCGACGAAGACTTTTCGTACGCGACTCTGCATGGCATA
CAAAACCTCGCCAAGCAAAAGAAGAGTCTGCTGTCTCTATTGGAGACGACGGTACAAGTC
CTCGTATATCGCCTTATCATGGACGATTCGGGAGTCAGCGATATCGAAGATGGAGGTTTT
GGATACGAGCCCACACTCAAGGAGCTCAATCTTCGCCAAAACAGCCTCAAAAGCATTGGA
CGCTACACCTTTGTTGGTATTTCAAACCTGGAGATTCTGGATCTGGGCGCTAACTCTATT
ACTACTGTTCAACCACGCTCCTTCGTGCCTCTACGCAACGTCAAGACTTTGGAAATGGAC
AACAACAAACTTACATGGATCAATTACTTTACGTTTCAAGGCCTTAGCCAGGTCAACTTC
ATCAATCTCGATAACAACAACATCAGCCGATGGTCCAGCGCCGCGTTCGCTCCTCTATGG
CAACTCGAGTATCTTCATCTCGCCTACAACCGTATTTCGTCGCTTGATGGCAGCAAACTC
GCAGGAATGAACGCTCTGAAATATTTGTCTCTGAAGGGCAACGTTATTGACAGCATCGCG
GCTGGTGCATTCAATGGCAAACCGAAACTGGAGACTTTGGACTTATCTGGCAACAAATTA
AGTAAGATAACTGCGCAAACATTCAGTGGATTGGTGTCACTAAAGACACTCAACCTGCGC
AACAACGTCATCAGGACGATCGACGACCTCTCTTTCGCACATATGCCTCAGATGCGCGAG
TTGGATCTGTCGCACAATGGCCTTGCAACATTGAGCCGAGGCATGTTTATCGGAATGGAG
AACATCAACAGCTTCAACGTTGCAGACAACTGGATGCAGGCAACTGCTCTCTCGCCTGAT
CCGGAGTTCATCGAACCAAGAAACAAATTGATTGAAGCTATCGGAATCATATGCCGTAAG
CCTGGAGTTTATTACGCTGATCTTTCTGGAAACTTACTTAAGCCTATGCTTCAGAACGTG
ACAGAAGCAGAACTTGGGTTTGACTTTTCTGAT
| Gene3D |
LRR_dom_sf (IPR032675) - T[41-192] 1.3E-27 - T[193-323] 1.0E-32 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[84-144] 6.9E-16 - T[228-288] 5.0E-18 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[84-106] 48.0 - T[107-130] 4.4 - T[131-154] 14.0 - T[155-178] 14.0 - T[179-202] 50.0 - T[203-226] 5.5 - T[228-250] 0.48 - T[251-274] 0.04 - T[275-298] 0.0098 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[85-106] 6.973 - T[109-130] 6.88 - T[133-154] 5.24 - T[157-178] 5.363 - T[181-202] 7.381 - T[205-226] 5.995 - T[229-250] 8.112 - T[253-274] 8.536 - T[277-298] 5.81 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRIG2_HUMAN | 31.944 % | 108 | 9.38E-26 |
| TRIL_HUMAN | 27.636 % | 108 | 1.47E-25 |
| LRIG3_HUMAN | 32.599 % | 109 | 5.31E-26 |