- Transcript 'KH2012:KH.C11.224.v2...' >
- Clone 'cien54723' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Clone 'ma338o03' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S12624.g08985.01.t
Possible name(s)
DDX17; DDX42; DDX5
Gene model
Location
S12624 [797 / 2,519]
Amino acid sequence
Length: 573
>Phfumi.CG.MTP2014.S12624.g08985.01.p
MPGYGRDRGDDRGYSRGGGYRDSGGYGRGNFGGSSYGGGRGGGRFGSDRGGSKYDSPGAS
LKAPRWENEKLTPFQKEFYQEHREVVNRPPHIVQQYYAEKGVTMHGNNLKNPVLTFQEPG
FPDYIQNRLLASGFKEPTTIQAIGWPHALSGQDIVGIAQTGSGKTLAFILPALIHINAQP
YLERGDGPIALVLCPTRELAQQVQAVANEYGNLCHIRNTCVYGGASKGPQLRDLERGCEI
VIATPGRLIDFLEARKMNLKRCTYLVLDEADRMLDMGFEPQIRKIINQIRPDRQTLMWSA
TWPKEVRKLAEDFLTNNVHVQVGSLQISANHNILQIIDVCTEDEKGEKLMRLMEEIMGED
ANKTIIFTETKRKCDQLTRNMRRDGWPAMCIHGDKSQPERDWVLNEFRTGKSPILVATDV
ASRGLDVSDVKFVINYDFPNQVEDYVHRIGRTARAEQTGTAYTFFTEGNMKQARDLIEIL
REAKQHINPRLIEMSQVRSFGKKSYGGYKSNGYGSRGGRGGGGSYNRNGSYGGGAKSSYG
QSNGFGNQSSQYGGGMNGSGQQYMMMPGGPVRM
Nucleotide sequence
Length: 1,722
>Phfumi.CG.MTP2014.S12624.g08985.01.t
ATGCCTGGTTACGGAAGAGATCGTGGTGATGACAGAGGCTACAGCAGAGGCGGTGGTTAC
CGTGACAGTGGTGGTTATGGCAGAGGGAACTTTGGTGGAAGCTCATATGGTGGTGGCCGT
GGTGGTGGACGATTTGGATCTGACAGAGGCGGCTCAAAATATGATAGCCCAGGTGCGTCA
TTGAAAGCCCCTAGATGGGAAAATGAGAAGCTAACACCATTCCAAAAAGAGTTTTATCAA
GAACATCGTGAAGTGGTAAATCGCCCACCACACATCGTCCAACAGTATTATGCTGAAAAG
GGAGTGACAATGCATGGCAACAACTTGAAGAACCCTGTCCTGACATTTCAAGAACCTGGG
TTTCCTGACTACATACAAAATCGTCTTCTAGCTAGTGGTTTTAAGGAACCAACAACAATT
CAGGCCATTGGGTGGCCTCATGCTTTGTCTGGTCAAGATATTGTGGGCATTGCACAGACT
GGTTCTGGCAAAACCCTTGCCTTTATCTTACCTGCTCTTATTCACATTAATGCACAACCT
TATCTGGAAAGAGGGGACGGTCCAATTGCACTTGTGCTTTGTCCCACTCGTGAATTGGCA
CAGCAAGTACAAGCTGTTGCAAATGAATATGGAAACCTGTGTCACATTAGAAACACTTGT
GTCTATGGTGGTGCATCAAAAGGTCCCCAGCTTCGGGATTTGGAAAGAGGCTGTGAAATT
GTAATCGCAACCCCTGGAAGGCTGATTGATTTTCTTGAAGCAAGAAAAATGAATCTAAAA
AGATGTACCTACCTGGTGCTTGATGAGGCTGACAGAATGCTTGATATGGGTTTTGAACCA
CAAATTCGCAAGATCATCAACCAGATTAGGCCTGACAGGCAAACGCTTATGTGGAGTGCT
ACCTGGCCAAAAGAGGTTCGCAAGCTTGCAGAGGACTTTCTTACCAACAATGTCCATGTA
CAAGTTGGCTCACTCCAAATTTCTGCCAACCACAACATCTTGCAAATCATTGATGTTTGT
ACAGAGGATGAAAAGGGTGAAAAATTGATGCGTTTGATGGAGGAAATAATGGGTGAAGAT
GCCAACAAAACCATTATTTTCACTGAAACTAAAAGAAAGTGCGATCAGCTTACAAGAAAC
ATGAGGCGGGATGGATGGCCTGCCATGTGTATTCATGGTGACAAATCACAACCCGAGCGT
GATTGGGTATTGAATGAGTTCCGCACAGGCAAATCACCCATTCTTGTTGCCACCGATGTG
GCCTCGCGTGGTTTAGATGTAAGTGATGTAAAGTTTGTTATCAACTATGATTTTCCAAAC
CAGGTTGAGGACTATGTTCATCGTATTGGACGAACTGCTCGTGCCGAACAGACTGGAACA
GCATACACCTTTTTCACAGAAGGAAACATGAAGCAAGCAAGGGATCTGATTGAAATTTTA
AGAGAAGCCAAGCAGCACATTAACCCACGCCTTATCGAAATGTCCCAAGTGAGAAGTTTT
GGAAAAAAGAGCTATGGAGGCTACAAAAGTAATGGTTATGGTTCAAGAGGTGGCCGTGGA
GGTGGTGGATCATATAACAGAAATGGTTCCTATGGCGGTGGTGCCAAATCTAGCTATGGA
CAGTCCAATGGCTTTGGTAACCAATCAAGTCAATATGGAGGAGGGATGAATGGTAGTGGA
CAACAATATATGATGATGCCTGGCGGCCCAGTTAGAATGTAG
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[114-142] 9.937 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[133-336] 7.5E-66 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[138-309] 8.6E-50 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[145-320] 32.421 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[186-477] 1.07E-76 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[266-274] . |
| CDD |
Helicase_C (IPR001650) - T[332-464] 3.25834E-42 |
| Pfam |
Helicase_C (IPR001650) - T[348-455] 2.3E-30 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[348-495] 25.253 |
| SMART |
Helicase_C (IPR001650) - T[375-456] 7.2E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX17_HUMAN | 58.123 % | 655 | 0 |
| DDX5_HUMAN | 59.043 % | 665 | 0 |
| DDX42_HUMAN | 41.722 % | 362 | 1.62E-114 |