Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S12693.g08997.04.t

Possible name(s)

ANGPTL1; FIBCD1; TNR

Gene model

Phfumi.CG.MTP2014.S12693.g08997

Location

S12693 [1,199 / 3,797]

Sequences

Amino acid sequence

Length: 231

>Phfumi.CG.MTP2014.S12693.g08997.04.p
MFLQLAAILLYYTSLVSAQQQCSFVTVPVCGDDVTVTPGSLMTGRGQKGVAGPPGKKGPR
GLSGPIGSKGAVGQKGEAVDLEEFKREMRERLRGLDEIHRMTSGQNCKLKIKMRGFDQTS
AYAQYNSFSIDDESDNYRLNVSGFSGTAGNSLADRHNGMQFSTKDRDNDRSSFNCALEWG
ANGGWWYDNCFHSTLNAGWGRSQGENHNMIWSRWKGYNEAIKESTMMIKCD

Nucleotide sequence

Length: 696

>Phfumi.CG.MTP2014.S12693.g08997.04.t
ATGTTTTTGCAATTAGCAGCGATTCTTCTGTATTATACGTCACTGGTCAGCGCTCAACAA
CAATGCAGCTTCGTAACGGTTCCAGTTTGCGGCGATGACGTCACTGTCACGCCTGGGAGT
TTGATGACGGGGAGGGGCCAAAAGGGGGTTGCAGGGCCCCCCGGAAAAAAAGGGCCAAGA
GGTTTGTCAGGCCCGATAGGCAGTAAGGGGGCCGTTGGACAAAAGGGAGAAGCAGTGGAT
TTGGAAGAATTTAAACGTGAAATGAGAGAAAGGCTCCGAGGTTTGGATGAAATACACAGG
ATGACAAGTGGTCAGAATTGCAAACTGAAAATTAAGATGAGAGGTTTTGATCAGACTTCA
GCTTACGCACAGTACAATTCGTTTTCAATCGACGATGAATCAGACAATTATCGTCTAAAC
GTTTCTGGTTTCAGTGGCACAGCGGGAAACAGTCTGGCCGACAGGCACAACGGGATGCAA
TTCTCTACCAAAGATCGGGATAATGATAGGTCTTCATTCAACTGTGCACTTGAATGGGGA
GCTAATGGTGGATGGTGGTATGATAATTGTTTCCATTCCACACTCAACGCTGGGTGGGGA
AGATCACAAGGTGAAAATCACAACATGATCTGGTCTCGCTGGAAAGGGTACAACGAAGCG
ATTAAAGAATCAACAATGATGATCAAATGTGATTAA

InterProScan

SMART	Fibrinogen_a/b/g_C_dom (IPR002181) - T[57-231] 6.7E-19
SUPERFAMILY	Fibrinogen-like_C (IPR036056) - T[90-229] 3.01E-40
Pfam	Fibrinogen_a/b/g_C_dom (IPR002181) - T[90-229] 2.2E-35
ProSiteProfiles	Fibrinogen_a/b/g_C_dom (IPR002181) - T[94-231] 28.3

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ANGL1_HUMAN	37.143 %	97.8	1.33E-23
TENR_HUMAN	40.441 %	108	5.16E-27
FBCD1_HUMAN	40.523 %	109	1.1E-27