Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'cien62005' > 
  2. Transcript 'KH2012:KH.C12.276.v1...' > 
  3. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S12740.g09008.01.t

Possible name(s)

RPS11

Gene model

Phfumi.CG.MTP2014.S12740.g09008

Location

S12740 [3,048 / 4,633]

Sequences

Amino acid sequence

Length: 125

>Phfumi.CG.MTP2014.S12740.g09008.01.p
NVLSLFSFTMADQAQTERAYQRQPTVFVNRKRVLTSSKKKLRHVKSIGLGFKTPREAVEG
HYIDKKCPFTGNVLIRGRILTGTVVKLKMQRTIVIRRDFLHYIRKYNRFEKRHKNMSVHL
SPCFR

Nucleotide sequence

Length: 375

>Phfumi.CG.MTP2014.S12740.g09008.01.t
AACGTTCTTTCCCTCTTTTCCTTCACCATGGCTGATCAGGCGCAGACTGAGAGAGCGTAC
CAGAGGCAACCAACAGTTTTCGTCAACCGCAAGAGGGTATTAACCAGCAGCAAGAAAAAG
CTCCGTCATGTGAAGAGCATCGGGTTAGGTTTTAAAACCCCACGGGAAGCAGTTGAGGGT
CATTACATTGACAAGAAGTGCCCTTTCACTGGTAATGTCTTGATTCGAGGTCGTATTCTG
ACTGGTACGGTTGTTAAGTTGAAGATGCAGCGTACAATTGTAATCCGAAGGGATTTCCTT
CATTACATTCGCAAGTACAATCGTTTTGAGAAGCGCCACAAAAACATGTCAGTGCATCTG
TCACCATGCTTCAGG

InterProScan

PANTHER
Ribosomal_S17/S11 (IPR000266) - T[10-124] 1.3E-54
Pfam
Ribosomal_S11_N (IPR032440) - T[15-80] 4.7E-32
SUPERFAMILY
NA-bd_OB-fold (IPR012340) - T[76-124] 3.08E-14
ProDom
Ribosomal_S17/S11 (IPR000266) - T[78-125] 6.0E-20
Pfam
Ribosomal_S17/S11 (IPR000266) - T[82-124] 7.2E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS11_HUMAN 78.151 % 191 7.09E-64