- Transcript 'Harore.CG.MTP2014.S1...' >
- Molecular Tool 'ZicL- MO (Yagi's 25mer MO)' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1295.g03535.01.t
Possible name(s)
FUBP1; FUBP3; NOVA2
Gene model
Location
S1295 [5,541 / 14,697]
Amino acid sequence
Length: 642
>Phfumi.CG.MTP2014.S1295.g03535.01.p
MAEGIANASGDAQIEINAVDNSNLQQEVPYSLLAAPGPMGDAPQKRALEDAEEPGPKKLA
PLPLSVANSVSNNQSVDPGMQAEAGMMSETISLPDDLVGLIIGRGGENIMRMQRETGCRI
QITQSMPGTKERPCTLSGTVEQIEVCRNMLNEIVSRSQAGTLGSNFNLASGGLQGMGDGM
DKSVTIDIPPDKCGLIIGKGGETIKMLQQTLGVKMLLIQETTENLGMAKPLKITGPQINI
DNAVNMIHQMMANRDQQIAQQKMDGNADPSMFGDDANRSFIPVPKAAVGVVIGKGGDMIN
QIQDETGTRIQFKPEEPGLPERMCSVTGRKDGVDAAIRKIHQIIQNVQERDGMMGGGGAI
GGGGAGPPGFGQWEGTNQNRGQNMCGLTTCEHLVPANRTGLVIGKGTQEQITAARRLIQE
KVDAGPGGTTNNQGYRGQIGGAPPGQPPPNAYAQPPPQQQAYGGLPPASYPAQTQLQAPP
QAQPAPQSFQQQPWGSQFQQWNPPTATTPQQNGTELGKPVADSNAAAWQSYLQLYGQAQA
IQQPAASAATAVAASQPDYTKQWDEYLKQTGAVAAAAAVAAPNAQAIQQPAPSAAPAAQP
ATTQATTDYSAAWAEYYRQYYAMHGQQYAAAAAVAGQAPAQT
Nucleotide sequence
Length: 1,929
>Phfumi.CG.MTP2014.S1295.g03535.01.t
ATGGCCGAGGGGATTGCTAATGCATCTGGAGACGCGCAAATTGAAATCAACGCTGTAGAC
AACTCAAATTTACAACAAGAGGTTCCCTACTCACTACTGGCAGCCCCTGGGCCTATGGGA
GACGCTCCACAGAAAAGAGCTTTAGAAGATGCTGAAGAGCCTGGGCCAAAGAAACTAGCT
CCTCTACCACTTAGTGTTGCTAATTCTGTGTCAAATAATCAGTCTGTTGACCCTGGAATG
CAAGCAGAAGCTGGCATGATGTCAGAGACCATCAGCCTACCGGATGATCTTGTGGGATTA
ATTATTGGTCGTGGAGGTGAAAACATCATGAGAATGCAAAGAGAAACTGGCTGTCGAATT
CAAATTACTCAAAGTATGCCTGGCACCAAAGAAAGACCATGCACTCTATCTGGCACAGTA
GAGCAAATTGAAGTGTGCAGGAATATGCTGAATGAGATAGTTTCAAGATCACAGGCTGGT
ACCCTTGGAAGCAACTTCAATCTTGCTTCTGGTGGTCTGCAAGGAATGGGAGATGGAATG
GACAAGTCTGTCACAATTGATATTCCTCCTGACAAGTGTGGACTCATTATTGGAAAGGGT
GGAGAGACCATTAAAATGCTACAACAAACTTTGGGAGTGAAGATGCTGCTCATCCAAGAA
ACAACTGAAAATCTTGGCATGGCTAAACCATTAAAGATAACTGGACCACAAATCAACATT
GATAATGCTGTCAACATGATTCACCAAATGATGGCCAACAGGGACCAGCAAATTGCTCAG
CAGAAAATGGATGGGAATGCTGATCCGTCAATGTTTGGCGATGATGCAAATCGGTCATTT
ATTCCTGTTCCAAAAGCCGCAGTTGGAGTGGTGATTGGTAAGGGTGGTGACATGATAAAT
CAGATTCAGGATGAAACAGGAACTCGCATTCAGTTCAAACCTGAGGAACCTGGACTCCCG
GAGAGAATGTGCAGTGTTACTGGCAGAAAAGATGGTGTTGATGCTGCTATCAGAAAGATC
CACCAGATCATACAGAATGTCCAAGAGCGCGATGGTATGATGGGAGGTGGGGGTGCCATT
GGCGGGGGGGGGGCTGGTCCACCTGGTTTTGGTCAATGGGAAGGAACCAATCAGAACAGA
GGTCAAAACATGTGTGGGCTGACCACTTGCGAACATTTGGTGCCGGCAAACAGAACTGGC
CTGGTCATTGGCAAAGGTACCCAAGAACAGATAACAGCAGCAAGGCGACTTATTCAAGAG
AAGGTTGATGCTGGTCCTGGTGGAACCACTAATAATCAAGGGTACCGAGGTCAAATAGGA
GGTGCCCCCCCTGGCCAACCCCCACCCAATGCATATGCCCAACCTCCCCCTCAGCAACAA
GCATATGGGGGTCTTCCACCAGCAAGTTACCCAGCACAGACCCAGCTGCAAGCCCCACCA
CAAGCTCAGCCAGCTCCACAGTCCTTTCAGCAACAGCCATGGGGAAGCCAATTTCAACAG
TGGAACCCACCAACTGCTACCACACCCCAACAGAATGGAACTGAACTGGGCAAACCTGTG
GCTGATAGTAATGCTGCAGCCTGGCAGTCGTATCTTCAGTTGTATGGTCAAGCGCAAGCT
ATTCAGCAACCTGCAGCTTCTGCTGCAACCGCTGTTGCTGCAAGTCAACCTGACTACACC
AAACAATGGGATGAATACCTGAAACAAACAGGGGCTGTAGCTGCTGCGGCTGCTGTAGCA
GCTCCTAATGCTCAAGCCATTCAACAACCAGCACCCAGTGCTGCTCCAGCTGCACAACCA
GCTACGACACAGGCTACTACTGATTATTCTGCTGCATGGGCTGAATACTACAGACAGTAT
TATGCTATGCATGGACAGCAATATGCGGCTGCTGCTGCAGTTGCTGGACAAGCTCCAGCA
CAAACCTAA
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[73-160] 9.7E-24 - T[172-253] 1.4E-18 - T[272-377] 4.1E-23 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[79-156] 1.33E-18 - T[180-258] 9.64E-15 - T[281-407] 2.92E-19 |
| SMART |
KH_dom (IPR004087) - T[85-155] 8.3E-16 - T[180-252] 6.7E-13 - T[275-345] 1.2E-15 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[89-152] 1.4E-17 - T[184-248] 3.3E-13 - T[280-341] 1.7E-16 |
| Pfam |
FUBP_C (IPR015096) - T[554-579] 4.4E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 38.108 % | 205 | 9.32E-58 |
| FUBP3_HUMAN | 34.211 % | 229 | 3.18E-67 |